RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 CPNE9Q8IYJ1 553 aa16.9■□□□□ 0.3
HDDC3-201ENST00000330334 IQCKQ8N0W5 287 aa16.9■□□□□ 0.3
HDDC3-201ENST00000330334 DTWD1Q8N5C7 304 aa16.9■□□□□ 0.3
HDDC3-201ENST00000330334 METTL27Q8N6F8 245 aaPredicted RBP16.9■□□□□ 0.3
HDDC3-201ENST00000330334 RUNDC3BQ96NL0 473 aa16.9■□□□□ 0.3
HDDC3-201ENST00000330334 CRB3Q9BUF7 120 aa16.9■□□□□ 0.3
HDDC3-201ENST00000330334 TGIF2Q9GZN2 237 aa16.9■□□□□ 0.3
HDDC3-201ENST00000330334 TMEM184CQ9NVA4 438 aa16.9■□□□□ 0.3
HDDC3-201ENST00000330334 RUVBL1Q9Y265 456 aaKnown RBP16.9■□□□□ 0.3
HDDC3-201ENST00000330334 AHSGP02765 367 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 FBLP22087 321 aaKnown RBP16.89■□□□□ 0.29
HDDC3-201ENST00000330334 GNLYP22749 145 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 ITGA3P26006 1051 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 GABRB3P28472 473 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 SP140Q13342 867 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 TSTA3Q13630 321 aaPredicted RBP16.89■□□□□ 0.29
HDDC3-201ENST00000330334 MORF4L2Q15014 288 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 MSS51Q4VC12 460 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 CRB2Q5IJ48 1285 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 AGAP7PQ5VUJ5 663 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 IRAK1BP1Q5VVH5 260 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 SHISA6Q6ZSJ9 500 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 PIWIL4Q7Z3Z4 852 aaKnown RBP16.89■□□□□ 0.29
HDDC3-201ENST00000330334 PDIK1LQ8N165 341 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 PPFIBP2Q8ND30 876 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 EEF1AKMT1Q8WVE0 214 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 LRRC39Q96DD0 335 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 AGAP4Q96P64 663 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 PSMG3-AS1Q96PY0 264 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 BARD1Q99728 777 aaKnown RBP16.89■□□□□ 0.29
HDDC3-201ENST00000330334 SLC29A3Q9BZD2 475 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 LHPPQ9H008 270 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 SYNPO2LQ9H987 977 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 PARVBQ9HBI1 364 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 C3orf18Q9UK00 162 aa16.89■□□□□ 0.29
HDDC3-201ENST00000330334 SHANK1Q9Y566 2161 aa16.88■□□□□ 0.29
HDDC3-201ENST00000330334 SPTAN1Q13813 2472 aaKnown RBP16.88■□□□□ 0.29
HDDC3-201ENST00000330334 MASP2O00187 686 aa16.88■□□□□ 0.29
HDDC3-201ENST00000330334 HPP00738 406 aa16.88■□□□□ 0.29
HDDC3-201ENST00000330334 UQCRFS1P47985 274 aa16.88■□□□□ 0.29
HDDC3-201ENST00000330334 FRG1Q14331 258 aaKnown RBP16.88■□□□□ 0.29
HDDC3-201ENST00000330334 HKDC1Q2TB90 917 aa16.88■□□□□ 0.29
HDDC3-201ENST00000330334 FHL5Q5TD97 284 aa16.88■□□□□ 0.29
HDDC3-201ENST00000330334 THEMIS2Q5TEJ8 643 aa16.88■□□□□ 0.29
HDDC3-201ENST00000330334 CREG2Q8IUH2 290 aa16.88■□□□□ 0.29
HDDC3-201ENST00000330334 PALM2Q8IXS6 379 aa16.88■□□□□ 0.29
HDDC3-201ENST00000330334 PPP4R1Q8TF05 950 aa16.88■□□□□ 0.29
HDDC3-201ENST00000330334 SNRNP40Q96DI7 357 aaKnown RBP16.88■□□□□ 0.29
HDDC3-201ENST00000330334 THAP11Q96EK4 314 aa16.88■□□□□ 0.29
HDDC3-201ENST00000330334 CERS2Q96G23 380 aa16.88■□□□□ 0.29
HDDC3-201ENST00000330334 FAM129AQ9BZQ8 928 aa16.88■□□□□ 0.29
HDDC3-201ENST00000330334 DRC3Q9H069 523 aa16.88■□□□□ 0.29
HDDC3-201ENST00000330334 MKKSQ9NPJ1 570 aaPredicted RBP16.88■□□□□ 0.29
HDDC3-201ENST00000330334 CCDC177Q9NQR7 707 aaPredicted RBP16.88■□□□□ 0.29
HDDC3-201ENST00000330334 C14orf105Q9NVL8 296 aa16.88■□□□□ 0.29
HDDC3-201ENST00000330334 STOX2Q9P2F5 926 aaPredicted RBP16.88■□□□□ 0.29
HDDC3-201ENST00000330334 CORO1CQ9ULV4 474 aaPredicted RBP16.88■□□□□ 0.29
HDDC3-201ENST00000330334 PDE10AQ9Y233 779 aa16.88■□□□□ 0.29
HDDC3-201ENST00000330334 HEATR5BQ9P2D3 2071 aa16.87■□□□□ 0.29
HDDC3-201ENST00000330334 TCP11X1B4DZS4 312 aa16.87■□□□□ 0.29
HDDC3-201ENST00000330334 H7BY64 318 aa16.87■□□□□ 0.29
HDDC3-201ENST00000330334 FOXS1O43638 330 aa16.87■□□□□ 0.29
HDDC3-201ENST00000330334 ACPPP15309 386 aa16.87■□□□□ 0.29
HDDC3-201ENST00000330334 CCND1P24385 295 aa16.87■□□□□ 0.29
HDDC3-201ENST00000330334 RPS15AP62244 130 aaKnown RBP16.87■□□□□ 0.29
HDDC3-201ENST00000330334 NDUFA9Q16795 377 aa16.87■□□□□ 0.29
HDDC3-201ENST00000330334 PRR30Q53SZ7 412 aaPredicted RBP16.87■□□□□ 0.29
HDDC3-201ENST00000330334 VWA2Q5GFL6 755 aa16.87■□□□□ 0.29
HDDC3-201ENST00000330334 TEDDM1Q5T9Z0 273 aa16.87■□□□□ 0.29
HDDC3-201ENST00000330334 PAQR3Q6TCH7 311 aa16.87■□□□□ 0.29
HDDC3-201ENST00000330334 LAPTM4BQ86VI4 370 aa16.87■□□□□ 0.29
HDDC3-201ENST00000330334 IGDCC3Q8IVU1 814 aa16.87■□□□□ 0.29
HDDC3-201ENST00000330334 AMER3Q8N944 861 aa16.87■□□□□ 0.29
HDDC3-201ENST00000330334 PRAP1Q96NZ9 151 aa16.87■□□□□ 0.29
HDDC3-201ENST00000330334 LMF1Q96S06 567 aa16.87■□□□□ 0.29
HDDC3-201ENST00000330334 NDNQ99608 321 aa16.87■□□□□ 0.29
HDDC3-201ENST00000330334 WDR77Q9BQA1 342 aaPredicted RBP16.87■□□□□ 0.29
HDDC3-201ENST00000330334 ILKAPQ9H0C8 392 aaPredicted RBP16.87■□□□□ 0.29
HDDC3-201ENST00000330334 PLAC1Q9HBJ0 212 aa16.87■□□□□ 0.29
HDDC3-201ENST00000330334 ZBTB20Q9HC78 741 aaPredicted RBP16.87■□□□□ 0.29
HDDC3-201ENST00000330334 CUEDC1Q9NWM3 386 aaPredicted RBP16.87■□□□□ 0.29
HDDC3-201ENST00000330334 LUZP4Q9P127 313 aa16.87■□□□□ 0.29
HDDC3-201ENST00000330334 TRPC4Q9UBN4 977 aa16.87■□□□□ 0.29
HDDC3-201ENST00000330334 ESPL1Q14674 2120 aa16.87■□□□□ 0.29
HDDC3-201ENST00000330334 CNTRLQ7Z7A1 2325 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 IDSB3KWA1 339 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 HAT1O14929 419 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 CYC1P08574 325 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 ANXA5P08758 320 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 GP1BBP13224 206 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 FDXRP22570 491 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 EMP2P54851 167 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 CDKN2DP55273 166 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 CBLBQ13191 982 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 BBS9Q3SYG4 887 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 STEAP4Q687X5 459 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 NDUFAF7Q7L592 441 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 ADCK2Q7Z695 626 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 SPNS2Q8IVW8 549 aa16.86■□□□□ 0.29
HDDC3-201ENST00000330334 PARP9Q8IXQ6 854 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 524.9 ms