RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 CDH1P12830 882 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 AHCYP23526 432 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 CDC25AP30304 524 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 CCKBRP32239 447 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 ABCG1P45844 678 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 OR3A1P47881 315 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 TDO2P48775 406 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 IL10RBQ08334 325 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 TRA2AQ13595 282 aaKnown RBP eCLIP4.74□□□□□ -1.65
LINC00397-202ENST00000606785 PDK1Q15118 436 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 UGP2Q16851 508 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 ITPRIPL2Q3MIP1 535 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 LYSMD4Q5XG99 296 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 CORO6Q6QEF8 472 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 SFR1Q86XK3 245 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 CLEC1AQ8NC01 280 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 NOA1Q8NC60 698 aaKnown RBP4.74□□□□□ -1.65
LINC00397-202ENST00000606785 PRCCQ92733 491 aaPredicted RBP4.74□□□□□ -1.65
LINC00397-202ENST00000606785 EPSTI1Q96J88 318 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 FAM210AQ96ND0 272 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 RASL10BQ96S79 203 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 NAP1L3Q99457 506 aaPredicted RBP4.74□□□□□ -1.65
LINC00397-202ENST00000606785 C17orf62Q9BQA9 187 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 KRT23Q9C075 422 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 ACTL8Q9H568 366 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 APOBEC3GQ9HC16 384 aaKnown RBP4.74□□□□□ -1.65
LINC00397-202ENST00000606785 TCF7L2Q9NQB0 619 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 TRMT6Q9UJA5 497 aaKnown RBP4.74□□□□□ -1.65
LINC00397-202ENST00000606785 NOCTQ9UK39 431 aaKnown RBP4.74□□□□□ -1.65
LINC00397-202ENST00000606785 RUVBL2Q9Y230 463 aaKnown RBP4.74□□□□□ -1.65
LINC00397-202ENST00000606785 TNFRSF18Q9Y5U5 241 aa4.74□□□□□ -1.65
LINC00397-202ENST00000606785 DHX29Q7Z478 1369 aaKnown RBP4.74□□□□□ -1.65
LINC00397-202ENST00000606785 CGNL1Q0VF96 1302 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 TRBV2A0A0J9YWF9 115 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 CRYABP02511 175 aaKnown RBP4.73□□□□□ -1.65
LINC00397-202ENST00000606785 NR4A2P43354 598 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 TNNT2P45379 298 aaPredicted RBP4.73□□□□□ -1.65
LINC00397-202ENST00000606785 RABIFP47224 123 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 ATXN3P54252 364 aaPredicted RBP4.73□□□□□ -1.65
LINC00397-202ENST00000606785 TUBA1BP68363 451 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 RPL24P83731 157 aaKnown RBP4.73□□□□□ -1.65
LINC00397-202ENST00000606785 MBTD1Q05BQ5 628 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 STXBP2Q15833 593 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 OR4A47Q6IF82 309 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 C11orf87Q6NUJ2 197 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 IL17RELQ6ZVW7 336 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 GPR141Q7Z602 305 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 PELI3Q8N2H9 469 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 CNNM3Q8NE01 707 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 OR10Q1Q8NGQ4 319 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 KIAA1524Q8TCG1 905 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 ITFG2Q969R8 447 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 PHF21BQ96EK2 531 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 CFAP36Q96G28 342 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 C17orf77Q96MU5 243 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 FAM111AQ96PZ2 611 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 RTP3Q9BQQ7 232 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 IDI2Q9BXS1 227 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 ACPTQ9BZG2 426 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 ZMYND12Q9H0C1 365 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 UBQLN3Q9H347 655 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 CUEDC2Q9H467 287 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 GAREM1Q9H706 876 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 FKRPQ9H9S5 495 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 MAGEF1Q9HAY2 307 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 SYTL2Q9HCH5 934 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 PHPT1Q9NRX4 125 aaPredicted RBP4.73□□□□□ -1.65
LINC00397-202ENST00000606785 GPR173Q9NS66 373 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 SLC38A7Q9NVC3 462 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 INTS10Q9NVR2 710 aaKnown RBP4.73□□□□□ -1.65
LINC00397-202ENST00000606785 ACTR3BQ9P1U1 418 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 ZDHHC2Q9UIJ5 367 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 SMC3Q9UQE7 1217 aa4.73□□□□□ -1.65
LINC00397-202ENST00000606785 STRAPQ9Y3F4 350 aaKnown RBP4.73□□□□□ -1.65
LINC00397-202ENST00000606785 C4orf47A7E2U8 309 aa4.72□□□□□ -1.65
LINC00397-202ENST00000606785 HNRNPCL2B2RXH8 293 aa4.72□□□□□ -1.65
LINC00397-202ENST00000606785 BAG4O95429 457 aaKnown RBP4.72□□□□□ -1.65
LINC00397-202ENST00000606785 SP9P0CG40 484 aa4.72□□□□□ -1.65
LINC00397-202ENST00000606785 FCGR1AP12314 374 aa4.72□□□□□ -1.65
LINC00397-202ENST00000606785 CCNA2P20248 432 aa4.72□□□□□ -1.65
LINC00397-202ENST00000606785 IL15P40933 162 aaPredicted RBP4.72□□□□□ -1.65
LINC00397-202ENST00000606785 NKX2-1P43699 371 aaPredicted RBP4.72□□□□□ -1.65
LINC00397-202ENST00000606785 GLIPR1P48060 266 aa4.72□□□□□ -1.65
LINC00397-202ENST00000606785 ZBTB17Q13105 803 aa4.72□□□□□ -1.65
LINC00397-202ENST00000606785 STXBP5Q5T5C0 1151 aa4.72□□□□□ -1.65
LINC00397-202ENST00000606785 ZNF770Q6IQ21 691 aaPredicted RBP4.72□□□□□ -1.65
LINC00397-202ENST00000606785 ZNF425Q6IV72 752 aa4.72□□□□□ -1.65
LINC00397-202ENST00000606785 ZNF554Q86TJ5 538 aa4.72□□□□□ -1.65
LINC00397-202ENST00000606785 NLRP14Q86W24 1093 aa4.72□□□□□ -1.65
LINC00397-202ENST00000606785 ZNF441Q8N8Z8 693 aa4.72□□□□□ -1.65
LINC00397-202ENST00000606785 CCDC63Q8NA47 563 aa4.72□□□□□ -1.65
LINC00397-202ENST00000606785 LNX1Q8TBB1 728 aaPredicted RBP4.72□□□□□ -1.65
LINC00397-202ENST00000606785 GRHL3Q8TE85 626 aa4.72□□□□□ -1.65
LINC00397-202ENST00000606785 TSACCQ96A04 125 aaPredicted RBP4.72□□□□□ -1.65
LINC00397-202ENST00000606785 HMCESQ96FZ2 354 aa4.72□□□□□ -1.65
LINC00397-202ENST00000606785 ADGRG7Q96K78 797 aa4.72□□□□□ -1.65
LINC00397-202ENST00000606785 ZNF560Q96MR9 790 aa4.72□□□□□ -1.65
LINC00397-202ENST00000606785 SPATA13Q96N96 652 aa4.72□□□□□ -1.65
LINC00397-202ENST00000606785 PKP2Q99959 881 aa4.72□□□□□ -1.65
LINC00397-202ENST00000606785 TSPYL1Q9H0U9 437 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms