RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 CSHL1Q14406 222 aa10.59□□□□□ -0.71
DDB1-222ENST00000543627 SOWAHCQ53LP3 525 aaPredicted RBP10.59□□□□□ -0.71
DDB1-222ENST00000543627 TEX35Q5T0J7 233 aa10.59□□□□□ -0.71
DDB1-222ENST00000543627 MROH9Q5TGP6 573 aa10.59□□□□□ -0.71
DDB1-222ENST00000543627 CAPN13Q6MZZ7 669 aaPredicted RBP10.59□□□□□ -0.71
DDB1-222ENST00000543627 FBXO42Q6P3S6 717 aa10.59□□□□□ -0.71
DDB1-222ENST00000543627 CEP128Q6ZU80 1094 aa10.59□□□□□ -0.71
DDB1-222ENST00000543627 IFT20Q8IY31 132 aa10.59□□□□□ -0.71
DDB1-222ENST00000543627 OR4N4Q8N0Y3 316 aa10.59□□□□□ -0.71
DDB1-222ENST00000543627 FBXO15Q8NCQ5 510 aaPredicted RBP10.59□□□□□ -0.71
DDB1-222ENST00000543627 RERGQ96A58 199 aaPredicted RBP10.59□□□□□ -0.71
DDB1-222ENST00000543627 CABS1Q96KC9 395 aa10.59□□□□□ -0.71
DDB1-222ENST00000543627 ZFYVE21Q9BQ24 234 aa10.59□□□□□ -0.71
DDB1-222ENST00000543627 NFU1Q9UMS0 254 aa10.59□□□□□ -0.71
DDB1-222ENST00000543627 ANKRD12Q6UB98 2062 aa10.59□□□□□ -0.71
DDB1-222ENST00000543627 ITPR1Q14643 2758 aa10.59□□□□□ -0.71
DDB1-222ENST00000543627 PCM1Q15154 2024 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 PTPRQQ9UMZ3 2332 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 FEZF1A0PJY2 475 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 C21orf140B9A014 251 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 H0YGG7 62 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 ERVH48-1M5A8F1 160 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 HAT1O14929 419 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 FKBP9O95302 570 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 TSPAN12O95859 305 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 SERPIND1P05546 499 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 ANXA5P08758 320 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 FURINP09958 794 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 ERGP11308 486 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 PTPN4P29074 926 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 OTX2P32243 289 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 CCR10P46092 362 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 OR1D4P47884 311 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 ARSFP54793 590 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 FOXL2P58012 376 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 ARF3P61204 181 aaPredicted RBP10.58□□□□□ -0.72
DDB1-222ENST00000543627 ABATP80404 500 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 NFKB2Q00653 900 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 MEF2AQ02078 507 aaPredicted RBP10.58□□□□□ -0.72
DDB1-222ENST00000543627 GRM7Q14831 915 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 NAA25Q14CX7 972 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 TSNQ15631 228 aaKnown RBP10.58□□□□□ -0.72
DDB1-222ENST00000543627 TCTE1Q5JU00 501 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 UBAP2Q5T6F2 1119 aaKnown RBP10.58□□□□□ -0.72
DDB1-222ENST00000543627 BORAQ6PGQ7 559 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 CMC1Q7Z7K0 106 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 C17orf64Q86WR6 236 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 DTWD1Q8N5C7 304 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 LRRN4CLQ8ND94 238 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.58□□□□□ -0.72
DDB1-222ENST00000543627 COL26A1Q96A83 441 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 TSNARE1Q96NA8 513 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 PLCD4Q9BRC7 762 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 GPR87Q9BY21 358 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 PHACTR1Q9C0D0 580 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 CDC42EP4Q9H3Q1 356 aaKnown RBP10.58□□□□□ -0.72
DDB1-222ENST00000543627 CUTCQ9NTM9 273 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 SRPK3Q9UPE1 567 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 DYRK1BQ9Y463 629 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 IKBKGQ9Y6K9 419 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 MGAQ8IWI9 3026 aa10.58□□□□□ -0.72
DDB1-222ENST00000543627 SNRNP200O75643 2136 aaKnown RBP10.58□□□□□ -0.72
DDB1-222ENST00000543627 IGKV1-8A0A0C4DH67 115 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 HYKKA2RU49 373 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 SRPX2O60687 465 aaPredicted RBP10.57□□□□□ -0.72
DDB1-222ENST00000543627 S100BP04271 92 aaPredicted RBP10.57□□□□□ -0.72
DDB1-222ENST00000543627 MSL3P1P0C860 447 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 CDH1P12830 882 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 RORAP35398 523 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 GRK3P35626 688 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 RAB10P61026 200 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 CBLBQ13191 982 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 HKDC1Q2TB90 917 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 FAM214AQ32MH5 1076 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 C18orf21Q32NC0 220 aaPredicted RBP10.57□□□□□ -0.72
DDB1-222ENST00000543627 LINC00303Q3SY05 128 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 NKAIN1Q4KMZ8 207 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 FBXO48Q5FWF7 155 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 RHBDD2Q6NTF9 364 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 SHISA6Q6ZSJ9 500 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 CYS1Q717R9 158 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 TBC1D1Q86TI0 1168 aaPredicted RBP10.57□□□□□ -0.72
DDB1-222ENST00000543627 PAQR7Q86WK9 346 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 LRRC56Q8IYG6 542 aaPredicted RBP10.57□□□□□ -0.72
DDB1-222ENST00000543627 PRSS58Q8IYP2 241 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 CSNK1A1LQ8N752 337 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 ATL1Q8WXF7 558 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 SEC14L1Q92503 715 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 TTC9Q92623 222 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 CATSPER2Q96P56 530 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 CYTH2Q99418 400 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 GPR22Q99680 433 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 MACROD1Q9BQ69 325 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 NLNQ9BYT8 704 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 PCBD2Q9H0N5 130 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 TSPYL1Q9H0U9 437 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 CD274Q9NZQ7 290 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 TLK1Q9UKI8 766 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 RNF112Q9ULX5 631 aa10.57□□□□□ -0.72
DDB1-222ENST00000543627 SH2B3Q9UQQ2 575 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms