RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 TSPAN8P19075 237 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 RPL10P27635 214 aaKnown RBP17.79■□□□□ 0.44
SDC2-202ENST00000518385 OPRD1P41143 372 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 HALP42357 657 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 TMED10P49755 219 aaKnown RBP17.79■□□□□ 0.44
SDC2-202ENST00000518385 DIO3P55073 304 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 PPP2R2BQ00005 443 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 ITPRIPL2Q3MIP1 535 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 C6orf136Q5SQH8 315 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 PRPF38BQ5VTL8 546 aaKnown RBP17.79■□□□□ 0.44
SDC2-202ENST00000518385 AGAP7PQ5VUJ5 663 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 SULT1C3Q6IMI6 304 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 ERAP2Q6P179 960 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 DLEU7Q6UYE1 221 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 R3HCC1LQ7Z5L2 792 aaKnown RBP17.79■□□□□ 0.44
SDC2-202ENST00000518385 STK32CQ86UX6 486 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 NRSN1Q8IZ57 195 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 EID3Q8N140 333 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 TRAM1L1Q8N609 369 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 CLDN19Q8N6F1 224 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 TMCO5AQ8N6Q1 288 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 CHDHQ8NE62 594 aaPredicted RBP17.79■□□□□ 0.44
SDC2-202ENST00000518385 SORCS1Q8WY21 1168 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 MYLIPQ8WY64 445 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 PPP3R2Q96LZ3 170 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 NSUN5Q96P11 429 aaKnown RBP17.79■□□□□ 0.44
SDC2-202ENST00000518385 ZSCAN5AQ9BUG6 496 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 NAA50Q9GZZ1 169 aaKnown RBP17.79■□□□□ 0.44
SDC2-202ENST00000518385 UBE2ZQ9H832 354 aaPredicted RBP17.79■□□□□ 0.44
SDC2-202ENST00000518385 CCNB1IP1Q9NPC3 277 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 AKIP1Q9NQ31 210 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 ASIC5Q9NY37 505 aa17.79■□□□□ 0.44
SDC2-202ENST00000518385 LRRC14BA6NHZ5 514 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 ZNF99A8MXY4 864 aaPredicted RBP17.78■□□□□ 0.44
SDC2-202ENST00000518385 CLIC3O95833 236 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 SHMT2P34897 504 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 CA5AP35218 305 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 POLR2IP36954 125 aaKnown RBP17.78■□□□□ 0.44
SDC2-202ENST00000518385 EIF2DP41214 584 aaKnown RBP17.78■□□□□ 0.44
SDC2-202ENST00000518385 UFM1P61960 85 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 MESP2Q0VG99 397 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 SMAD4Q13485 552 aaKnown RBP17.78■□□□□ 0.44
SDC2-202ENST00000518385 PLCL1Q15111 1095 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 CCDC85BQ15834 202 aaPredicted RBP17.78■□□□□ 0.44
SDC2-202ENST00000518385 PRSS48Q7RTY5 328 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 SYVN1Q86TM6 617 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 FAM9CQ8IZT9 166 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 SVOPQ8N4V2 548 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 TMIEQ8NEW7 156 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 PROKR1Q8TCW9 393 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 PHF10Q8WUB8 498 aaKnown RBP17.78■□□□□ 0.44
SDC2-202ENST00000518385 UBTD2Q8WUN7 234 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 NODALQ96S42 347 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 SEPHS2Q99611 448 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 CDX2Q99626 313 aaPredicted RBP17.78■□□□□ 0.44
SDC2-202ENST00000518385 TOR3AQ9H497 397 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 PCDH12Q9NPG4 1184 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 SEMA4BQ9NPR2 832 aaPredicted RBP17.78■□□□□ 0.44
SDC2-202ENST00000518385 DAPK2Q9UIK4 370 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 BTRCQ9Y297 605 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 BPTFQ12830 3046 aa17.78■□□□□ 0.44
SDC2-202ENST00000518385 EDDM13A0A1B0GTR0 161 aa17.77■□□□□ 0.44
SDC2-202ENST00000518385 ISPDA4D126 451 aa17.77■□□□□ 0.44
SDC2-202ENST00000518385 PRRT4C9JH25 899 aa17.77■□□□□ 0.44
SDC2-202ENST00000518385 AREL1O15033 823 aa17.77■□□□□ 0.44
SDC2-202ENST00000518385 MBTPS2O43462 519 aa17.77■□□□□ 0.44
SDC2-202ENST00000518385 BCAS1O75363 584 aaPredicted RBP17.77■□□□□ 0.44
SDC2-202ENST00000518385 E2F6O75461 281 aa17.77■□□□□ 0.44
SDC2-202ENST00000518385 MPC1LP0DKB6 136 aa17.77■□□□□ 0.44
SDC2-202ENST00000518385 ATP1B2P14415 290 aaPredicted RBP17.77■□□□□ 0.44
SDC2-202ENST00000518385 OR4D2P58180 307 aa17.77■□□□□ 0.44
SDC2-202ENST00000518385 ITGADQ13349 1161 aa17.77■□□□□ 0.44
SDC2-202ENST00000518385 PLEKHS1Q5SXH7 462 aa17.77■□□□□ 0.44
SDC2-202ENST00000518385 TUBA3EQ6PEY2 450 aa17.77■□□□□ 0.44
SDC2-202ENST00000518385 LACC1Q8IV20 430 aa17.77■□□□□ 0.44
SDC2-202ENST00000518385 NXPE3Q969Y0 559 aa17.77■□□□□ 0.44
SDC2-202ENST00000518385 TAMM41Q96BW9 452 aa17.77■□□□□ 0.44
SDC2-202ENST00000518385 ALPK1Q96QP1 1244 aa17.77■□□□□ 0.44
SDC2-202ENST00000518385 FUNDC2Q9BWH2 189 aa17.77■□□□□ 0.44
SDC2-202ENST00000518385 ADNPQ9H2P0 1102 aa17.77■□□□□ 0.44
SDC2-202ENST00000518385 TRIT1Q9H3H1 467 aaKnown RBP17.77■□□□□ 0.44
SDC2-202ENST00000518385 TPRKBQ9Y3C4 175 aa17.77■□□□□ 0.44
SDC2-202ENST00000518385 NCF1BA6NI72 391 aaPredicted RBP17.76■□□□□ 0.43
SDC2-202ENST00000518385 NCF1CA8MVU1 366 aaPredicted RBP17.76■□□□□ 0.43
SDC2-202ENST00000518385 GSTA4O15217 222 aa17.76■□□□□ 0.43
SDC2-202ENST00000518385 SLC16A5O15375 505 aa17.76■□□□□ 0.43
SDC2-202ENST00000518385 NDUFS2O75306 463 aa17.76■□□□□ 0.43
SDC2-202ENST00000518385 RECQL5O94762 991 aaPredicted RBP17.76■□□□□ 0.43
SDC2-202ENST00000518385 C8GP07360 202 aa17.76■□□□□ 0.43
SDC2-202ENST00000518385 NCF1P14598 390 aaPredicted RBP17.76■□□□□ 0.43
SDC2-202ENST00000518385 NCK1P16333 377 aa17.76■□□□□ 0.43
SDC2-202ENST00000518385 AOAHP28039 575 aa17.76■□□□□ 0.43
SDC2-202ENST00000518385 ELK4P28324 431 aa17.76■□□□□ 0.43
SDC2-202ENST00000518385 AKT1P31749 480 aa17.76■□□□□ 0.43
SDC2-202ENST00000518385 PIK3CGP48736 1102 aa17.76■□□□□ 0.43
SDC2-202ENST00000518385 CCR3P51677 355 aa17.76■□□□□ 0.43
SDC2-202ENST00000518385 CSNK2BP67870 215 aa17.76■□□□□ 0.43
SDC2-202ENST00000518385 ATP1A4Q13733 1029 aa17.76■□□□□ 0.43
SDC2-202ENST00000518385 GBX1Q14549 363 aa17.76■□□□□ 0.43
SDC2-202ENST00000518385 RBBP7Q16576 425 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms