RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 CMPK1P30085 196 aa17.12■□□□□ 0.33
CHCHD3-203ENST00000448878 KRTAP10-9P60411 292 aa17.12■□□□□ 0.33
CHCHD3-203ENST00000448878 ARF3P61204 181 aaPredicted RBP17.12■□□□□ 0.33
CHCHD3-203ENST00000448878 CDH17Q12864 832 aa17.12■□□□□ 0.33
CHCHD3-203ENST00000448878 SEMA3AQ14563 771 aa17.12■□□□□ 0.33
CHCHD3-203ENST00000448878 ZNF766Q5HY98 468 aa17.12■□□□□ 0.33
CHCHD3-203ENST00000448878 TSTD2Q5T7W7 516 aa17.12■□□□□ 0.33
CHCHD3-203ENST00000448878 MFSD4BQ5TF39 518 aa17.12■□□□□ 0.33
CHCHD3-203ENST00000448878 FBXO42Q6P3S6 717 aa17.12■□□□□ 0.33
CHCHD3-203ENST00000448878 C10orf90Q96M02 699 aa17.12■□□□□ 0.33
CHCHD3-203ENST00000448878 FOPNLQ96NB1 174 aa17.12■□□□□ 0.33
CHCHD3-203ENST00000448878 DPH7Q9BTV6 452 aa17.12■□□□□ 0.33
CHCHD3-203ENST00000448878 TSPAN10Q9H1Z9 355 aaPredicted RBP17.12■□□□□ 0.33
CHCHD3-203ENST00000448878 C14orf105Q9NVL8 296 aa17.12■□□□□ 0.33
CHCHD3-203ENST00000448878 MRFAP1Q9Y605 127 aa17.12■□□□□ 0.33
CHCHD3-203ENST00000448878 F8P00451 2351 aa17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 IGLV3-12A0A075B6K2 115 aa17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 TTI1O43156 1089 aa17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 VPS26AO75436 327 aa17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 SLCO2B1O94956 709 aa17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 C1orf105O95561 183 aa17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 PTPN7P35236 360 aa17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 ST13P50502 369 aaKnown RBP17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 YBX1P67809 324 aaKnown RBP17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 DSG2Q14126 1118 aa17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 SYT16Q17RD7 645 aa17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 RNF44Q7L0R7 432 aa17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 OR2A1Q8NGT9 310 aa17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 METTL21AQ8WXB1 218 aa17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 MRFAP1L1Q96HT8 127 aa17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 TMEM121Q9BTD3 319 aa17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 RNF32Q9H0A6 362 aa17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 ZNF700Q9H0M5 742 aa17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 GPAMQ9HCL2 828 aa17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 MKKSQ9NPJ1 570 aaPredicted RBP17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 KLHL1Q9NR64 748 aa17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 ENAMQ9NRM1 1142 aa17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 CELSR1Q9NYQ6 3014 aa17.11■□□□□ 0.33
CHCHD3-203ENST00000448878 RCCD1A6NED2 376 aa17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 DIAPH2O60879 1101 aa17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 MLYCDO95822 493 aa17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 CAPN3P20807 821 aa17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 PSMA3P25788 255 aa17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 KIR3DL1P43629 444 aa17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 GDF10P55107 478 aa17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 ALDH6A1Q02252 535 aaKnown RBP17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 FASTKQ14296 549 aaKnown RBP17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 PCOLCEQ15113 449 aa17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 HKDC1Q2TB90 917 aa17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 AARS2Q5JTZ9 985 aaKnown RBP17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 FCRLBQ6BAA4 426 aa17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 LRRC8BQ6P9F7 803 aa17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 OTOAQ7RTW8 1153 aa17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 CDH24Q86UP0 819 aa17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 CSNK1A1LQ8N752 337 aa17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 MAGEC3Q8TD91 643 aa17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 RERGQ96A58 199 aaPredicted RBP17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 ZNF778Q96MU6 729 aa17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 PANX3Q96QZ0 392 aa17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 TUBB6Q9BUF5 446 aa17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 MRPS30Q9NP92 439 aaKnown RBP17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 ABCF3Q9NUQ8 709 aa17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 RUVBL1Q9Y265 456 aaKnown RBP17.1■□□□□ 0.33
CHCHD3-203ENST00000448878 A0A0A6YYC8 382 aaPredicted RBP17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 IGHV3-20A0A0C4DH32 117 aa17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 E7EVH7 732 aa17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 I3L1I5 382 aaPredicted RBP17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 PRMT5O14744 637 aaPredicted RBP17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 SEC24DO94855 1032 aaPredicted RBP17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 C8orf89P0DMQ9 161 aa17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 AGAP20933 346 aa17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 ADRA1DP25100 572 aa17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 CCNFP41002 786 aa17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 TLE4Q04727 773 aa17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 NAA25Q14CX7 972 aa17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 CDSNQ15517 529 aa17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 PRTGQ2VWP7 1150 aa17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 BTBD16Q32M84 506 aa17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 SUSD1Q6UWL2 747 aa17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 NCCRP1Q6ZVX7 275 aaPredicted RBP17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 ZNF534Q76KX8 674 aa17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 SPPL2CQ8IUH8 684 aa17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 ADAMTS18Q8TE60 1221 aa17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 MVB12AQ96EY5 273 aa17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 CATSPERZQ9NTU4 200 aa17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 ANKRD10Q9NXR5 420 aa17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 GNPTGQ9UJJ9 305 aa17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 R3HDM2Q9Y2K5 976 aaKnown RBP17.09■□□□□ 0.33
CHCHD3-203ENST00000448878 LOC102723996A0A087X1L8 192 aa17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 A0A1W2PPV9 198 aa17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 OR2A25A4D2G3 310 aa17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 NPIPA5E9PKD4 350 aa17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 KPNA5O15131 536 aa17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 ABOP16442 354 aa17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 RPA3P35244 121 aaPredicted RBP17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 SLC26A3P40879 764 aa17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 MAT1AQ00266 395 aaKnown RBP17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 ADCK2Q7Z695 626 aa17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 BEST3Q8N1M1 668 aa17.08■□□□□ 0.32
CHCHD3-203ENST00000448878 OTUD6BQ8N6M0 293 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms