RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 CEP78Q5JTW2 689 aa8.95□□□□□ -0.98
LIMCH1-202ENST00000381753 CARD17Q5XLA6 110 aa8.95□□□□□ -0.98
LIMCH1-202ENST00000381753 SULT1C3Q6IMI6 304 aa8.95□□□□□ -0.98
LIMCH1-202ENST00000381753 BNC2Q6ZN30 1099 aaPredicted RBP8.95□□□□□ -0.98
LIMCH1-202ENST00000381753 EIF3MQ7L2H7 374 aaKnown RBP8.95□□□□□ -0.98
LIMCH1-202ENST00000381753 HDDC2Q7Z4H3 204 aa8.95□□□□□ -0.98
LIMCH1-202ENST00000381753 SLC22A16Q86VW1 577 aa8.95□□□□□ -0.98
LIMCH1-202ENST00000381753 CEP97Q8IW35 865 aa8.95□□□□□ -0.98
LIMCH1-202ENST00000381753 PYROXD2Q8N2H3 581 aa8.95□□□□□ -0.98
LIMCH1-202ENST00000381753 RIBC1Q8N443 379 aaPredicted RBP8.95□□□□□ -0.98
LIMCH1-202ENST00000381753 OR9A1PQ8NGU1 263 aa8.95□□□□□ -0.98
LIMCH1-202ENST00000381753 SPATA22Q8NHS9 363 aa8.95□□□□□ -0.98
LIMCH1-202ENST00000381753 BORCS8Q96FH0 119 aa8.95□□□□□ -0.98
LIMCH1-202ENST00000381753 AMDHD1Q96NU7 426 aa8.95□□□□□ -0.98
LIMCH1-202ENST00000381753 TRIM8Q9BZR9 551 aa8.95□□□□□ -0.98
LIMCH1-202ENST00000381753 ARNT2Q9HBZ2 717 aa8.95□□□□□ -0.98
LIMCH1-202ENST00000381753 TRIM39Q9HCM9 518 aa8.95□□□□□ -0.98
LIMCH1-202ENST00000381753 BTRCQ9Y297 605 aa8.95□□□□□ -0.98
LIMCH1-202ENST00000381753 MAP4K5Q9Y4K4 846 aa8.95□□□□□ -0.98
LIMCH1-202ENST00000381753 COL2A1P02458 1487 aaPredicted RBP8.95□□□□□ -0.98
LIMCH1-202ENST00000381753 FAM237AA0A1B0GTK4 181 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 PRSS38A1L453 326 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 SLC9B1P1A6NJY1 282 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 RAD1O60671 282 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 SOCS5O75159 536 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 UGT2B17O75795 530 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 KCNC4Q03721 635 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 GPRC6AQ5T6X5 926 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 ZDHHC14Q8IZN3 488 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 OR10T2Q8NGX3 314 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 TSEN15Q8WW01 171 aaKnown RBP8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 SPRYD4Q8WW59 207 aaPredicted RBP8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 COQ8BQ96D53 544 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 ELF4Q99607 663 aaPredicted RBP8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 GBA3Q9H227 469 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 SLC22A14Q9Y267 594 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 TRBV11-1A0A0K0K1C0 115 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 SH3PXD2BA1X283 911 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 RFXANKO14593 260 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 OR10H3O60404 316 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 RFPL1O75677 317 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 ARFIP1P53367 373 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 NPRL3Q12980 569 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 DYNC1I2Q13409 638 aaKnown RBP8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 SEMA5AQ13591 1074 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 ZNF648Q5T619 568 aaPredicted RBP8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 LDB1Q86U70 411 aaPredicted RBP8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 ETFBKMTQ8IXQ9 262 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 ZFPM2Q8WW38 1151 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 NINJ1Q92982 152 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 GPR83Q9NYM4 423 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 ZNF23P17027 643 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 ITGA2P17301 1181 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 CD247P20963 164 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 PCYT1AP49585 367 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 COPAP53621 1224 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 UGT2B15P54855 530 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 TERF2Q15554 542 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 IL17AQ16552 155 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 RIPOR1Q6ZS17 1223 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 SPATA21Q7Z572 469 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 IQCKQ8N0W5 287 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 PIAS4Q8N2W9 510 aaPredicted RBP8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 TSEN2Q8NCE0 465 aaKnown RBP8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 PDPRQ8NCN5 879 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 GRHL3Q8TE85 626 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 ITCHQ96J02 903 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 NTPCRQ9BSD7 190 aaKnown RBP8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 MS4A12Q9NXJ0 267 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 FBXO4Q9UKT5 387 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 NR2F6P10588 404 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 PPIBP23284 216 aaKnown RBP8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 TALDO1P37837 337 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 TPMTP51580 245 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 RPL26P61254 145 aaKnown RBP8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 DMPKQ09013 629 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 IRF4Q15306 451 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 SYPL2Q5VXT5 272 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 SLC39A4Q6P5W5 647 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 SLC46A3Q7Z3Q1 461 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 OR4C15Q8NGM1 316 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 EPS8L1Q8TE68 723 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 TAAR9Q96RI9 348 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 EFCAB11Q9BUY7 163 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 MTG2Q9H4K7 406 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 RPL26L1Q9UNX3 145 aaKnown RBP8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 LHX6Q9UPM6 363 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 ARL2BPQ9Y2Y0 163 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 ZNF451Q9Y4E5 1061 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 A0A1W2PPL8 197 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 TGFB1P01137 390 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 CD79AP11912 226 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 CKMT2P17540 419 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 HOXA9P31269 272 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 APLNRP35414 380 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 TMC3Q7Z5M5 1100 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 APCDD1Q8J025 514 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 ZNF671Q8TAW3 534 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 ST7LQ8TDW4 575 aa8.94□□□□□ -0.98
LIMCH1-202ENST00000381753 SMOQ99835 787 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms