RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 PCDHGA7Q9Y5G6 932 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 CDC7O00311 574 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 KPNA4O00629 521 aaPredicted RBP10.18□□□□□ -0.78
LIG1-220ENST00000601091 OR56A5P0C7T3 313 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 THRBP10828 461 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 UGT1A6P19224 532 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 GABRB3P28472 473 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 SLC5A2P31639 672 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 GJA5P36382 358 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 MAGEA12P43365 314 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 RPL34P49207 117 aaKnown RBP10.18□□□□□ -0.78
LIG1-220ENST00000601091 EPHB3P54753 998 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 SEMA3BQ13214 749 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 ZNF267Q14586 743 aaPredicted RBP10.18□□□□□ -0.78
LIG1-220ENST00000601091 ZBED5Q49AG3 693 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 HACD2Q6Y1H2 254 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 ZNF621Q6ZSS3 439 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 THAP5Q7Z6K1 395 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 GLRX5Q86SX6 157 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 ARHGAP12Q8IWW6 846 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 HUS1BQ8NHY5 278 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 RASSF5Q8WWW0 418 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 POP5Q969H6 163 aaKnown RBP10.18□□□□□ -0.78
LIG1-220ENST00000601091 BORCS5Q969J3 196 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 KCNA7Q96RP8 456 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 DERL2Q9GZP9 239 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 KCNN2Q9H2S1 579 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 RIBC2Q9H4K1 309 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 PLAC1Q9HBJ0 212 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 CCM2LQ9NUG4 571 aaPredicted RBP10.18□□□□□ -0.78
LIG1-220ENST00000601091 MARCH4Q9P2E8 410 aaPredicted RBP10.18□□□□□ -0.78
LIG1-220ENST00000601091 ENTPD4Q9Y227 616 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 ASB4Q9Y574 426 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 ASNA1O43681 348 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 TBL1XO60907 577 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 JRKO75564 520 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 CDC123O75794 336 aaPredicted RBP10.18□□□□□ -0.78
LIG1-220ENST00000601091 IGSF6O95976 241 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 C1QAP02745 245 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 JUNP05412 331 aaKnown RBP10.18□□□□□ -0.78
LIG1-220ENST00000601091 CDKN2DP55273 166 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 KCNJ10P78508 379 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 SERINC3Q13530 473 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 ASCC1Q8N9N2 400 aaKnown RBP10.18□□□□□ -0.78
LIG1-220ENST00000601091 RHEBL1Q8TAI7 183 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 ZDHHC12Q96GR4 267 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 SLC6A17Q9H1V8 727 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 CACYBPQ9HB71 228 aaKnown RBP10.18□□□□□ -0.78
LIG1-220ENST00000601091 TMLHEQ9NVH6 421 aa10.18□□□□□ -0.78
LIG1-220ENST00000601091 SEPT4O43236 478 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 CRTAPO75718 401 aaPredicted RBP10.17□□□□□ -0.78
LIG1-220ENST00000601091 PIAS2O75928 621 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 MBP02144 154 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 CNPP09543 421 aaKnown RBP10.17□□□□□ -0.78
LIG1-220ENST00000601091 HOXB1P14653 301 aaPredicted RBP10.17□□□□□ -0.78
LIG1-220ENST00000601091 CD1DP15813 335 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 CYP2A7P20853 494 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 SERPINA4P29622 427 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 HSPA7P48741 367 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 CDK9P50750 372 aaKnown RBP10.17□□□□□ -0.78
LIG1-220ENST00000601091 MYBPC1Q00872 1141 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 BOP1Q14137 746 aaKnown RBP10.17□□□□□ -0.78
LIG1-220ENST00000601091 ERV3-1Q14264 604 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 RFX4Q33E94 735 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 RABL3Q5HYI8 236 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 Q5PR19 223 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 SLC45A3Q96JT2 553 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 KLHL32Q96NJ5 620 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 SOX17Q9H6I2 414 aaPredicted RBP10.17□□□□□ -0.78
LIG1-220ENST00000601091 POPDC3Q9HBV1 291 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 CSNK1G1Q9HCP0 422 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 IMPAD1Q9NX62 359 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 USE1Q9NZ43 259 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 SPASTQ9UBP0 616 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 MLXQ9UH92 298 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 DNAJC15Q9Y5T4 150 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 A0A1B0GVM2 712 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 MGAT4DA6NG13 374 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 HMX3A6NHT5 357 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 LINC00587B1AMM8 73 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 PLOD2O00469 737 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 SLC25A14O95258 325 aaPredicted RBP10.17□□□□□ -0.78
LIG1-220ENST00000601091 APOA1P02647 267 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 TNNI3P19429 210 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 CORO1AP31146 461 aaKnown RBP10.17□□□□□ -0.78
LIG1-220ENST00000601091 ARRB2P32121 409 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 OR1D2P34982 312 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 MAPK8P45983 427 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 GPR15P49685 360 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 DIO3P55073 304 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 RPS24P62847 133 aaKnown RBP10.17□□□□□ -0.78
LIG1-220ENST00000601091 ECT2LQ008S8 904 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 CACNG1Q06432 222 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 GRB7Q14451 532 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 XKR4Q5GH76 650 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 PERM1Q5SV97 790 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 KIAA0319Q5VV43 1072 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 FAM171BQ6P995 826 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 LINGO4Q6UY18 593 aa10.17□□□□□ -0.78
LIG1-220ENST00000601091 KCTD8Q6ZWB6 473 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms