RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 WDFY2Q96P53 400 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 MAPKAP1Q9BPZ7 522 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 OCR1Q9BZK8 76 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 DNAJC18Q9H819 358 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 MARCH7Q9H992 704 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 POLR1BQ9H9Y6 1135 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 CHMP1AQ9HD42 196 aaPredicted RBP0.49□□□□□ -2.33
COPB1-212ENST00000534771 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP0.49□□□□□ -2.33
COPB1-212ENST00000534771 PLSCR3Q9NRY6 295 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 RRP7BPQ9NSQ0 103 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 OSER1Q9NX31 292 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 TAS2R10Q9NYW0 307 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 ZNF319Q9P2F9 582 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 Q9UF83 564 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 KLK12Q9UKR0 248 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 NENFQ9UMX5 172 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 TRIM17Q9Y577 477 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 AUP1Q9Y679 476 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 TDRD6O60522 2096 aaKnown RBP0.49□□□□□ -2.33
COPB1-212ENST00000534771 PCDH11YQ9BZA8 1340 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 IGHV3-16A0A0C4DH30 117 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 KLF18A0A0U1RQI7 1052 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 A0A1B0GTH9 108 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 FAM237BA0A1B0GVD1 139 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 HEPACAM2A8MVW5 462 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 TNFSF11O14788 317 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 SURF4O15260 269 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 XRCC3O43542 346 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 TLX2O43763 284 aaPredicted RBP0.48□□□□□ -2.33
COPB1-212ENST00000534771 SRPX2O60687 465 aaPredicted RBP0.48□□□□□ -2.33
COPB1-212ENST00000534771 ERAL1O75616 437 aaKnown RBP0.48□□□□□ -2.33
COPB1-212ENST00000534771 RSL1D1O76021 490 aaKnown RBP0.48□□□□□ -2.33
COPB1-212ENST00000534771 BAIAP3O94812 1187 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 VENTXO95231 258 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 ACSL3O95573 720 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 QDPRP09417 244 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 P0C879 139 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 VDRP11473 427 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 ODC1P11926 461 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 NR2C1P13056 603 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 GPX3P22352 226 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 JAK1P23458 1154 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 ABCD3P28288 659 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 EPHA8P29322 1005 aaPredicted RBP0.48□□□□□ -2.33
COPB1-212ENST00000534771 PKLRP30613 574 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 MATKP42679 507 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 DNA2P51530 1060 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 CCR3P51677 355 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 NDST2P52849 883 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 TPD52P55327 224 aaPredicted RBP0.48□□□□□ -2.33
COPB1-212ENST00000534771 WNT4P56705 351 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 TBX4P57082 545 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 ERVPABLB-1P60509 514 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 SRPXP78539 464 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 NAAAQ02083 359 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 ZNF415Q09FC8 603 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 PPFIA1Q13136 1202 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 KIAA0141Q14154 515 aaPredicted RBP0.48□□□□□ -2.33
COPB1-212ENST00000534771 BRD3Q15059 726 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 SIX1Q15475 284 aaPredicted RBP0.48□□□□□ -2.33
COPB1-212ENST00000534771 LTB4RQ15722 352 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 TMEM44Q2T9K0 475 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 PCGF3Q3KNV8 242 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 SPDYCQ5MJ68 293 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 ELFN2Q5R3F8 820 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 C9orf129Q5T035 196 aaKnown RBP0.48□□□□□ -2.33
COPB1-212ENST00000534771 SLC9C2Q5TAH2 1124 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 EMBQ6PCB8 327 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 CYP20A1Q6UW02 462 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 C5orf24Q7Z6I8 188 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 RPAINQ86UA6 219 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 LRRTM4Q86VH4 590 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 ARMC8Q8IUR7 673 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 SPICE1Q8N0Z3 855 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 FAM89BQ8N5H3 189 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 FRMD1Q8N878 549 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 PAPD5Q8NDF8 572 aaKnown RBP0.48□□□□□ -2.33
COPB1-212ENST00000534771 LINC01006Q8NI28 216 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 CHURC1Q8WUH1 139 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 SLC22A18Q96BI1 424 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 DHX58Q96C10 678 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 STARD4Q96DR4 205 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 OR2A14Q96R47 310 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 ISCA1Q9BUE6 129 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 FNDC11Q9BVV2 318 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 HES7Q9BYE0 225 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 PDCL3Q9H2J4 239 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 WFDC1Q9HC57 220 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 ZNF275Q9NSD4 429 aaPredicted RBP0.48□□□□□ -2.33
COPB1-212ENST00000534771 SETD4Q9NVD3 440 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 VNN3Q9NY84 501 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 NLGN3Q9NZ94 848 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 TAGLN3Q9UI15 199 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 MTMR6Q9Y217 621 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 PLEKHA6Q9Y2H5 1048 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 PCDHGB3Q9Y5G1 929 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 ZFP37Q9Y6Q3 630 aaPredicted RBP0.48□□□□□ -2.33
COPB1-212ENST00000534771 PIAS3Q9Y6X2 628 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 R4GN57 208 aa0.48□□□□□ -2.33
COPB1-212ENST00000534771 MUC5BQ9HC84 5762 aaPredicted RBP0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms