RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 SGCGQ13326 291 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 EXT1Q16394 746 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 FIGLAQ6QHK4 219 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 TMUB2Q71RG4 321 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 ESX1Q8N693 406 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 SPPL2AQ8TCT8 520 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.8□□□□□ -2.12
CCDC93-209ENST00000488908 DHX58Q96C10 678 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 CCDC28BQ9BUN5 200 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 OCR1Q9BZK8 76 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 SH2D4AQ9H788 454 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 RRN3Q9NYV6 651 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 IL17CQ9P0M4 197 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.8□□□□□ -2.12
CCDC93-209ENST00000488908 SESN1Q9Y6P5 492 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 A0A1W2PR77 199 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 LIPT2A6NK58 231 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 A8MZ25 164 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 TCP11X1B4DZS4 312 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 K7ENM7 598 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 FPGTO14772 594 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 SURF4O15260 269 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 OR10H2O60403 315 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 LDHAP00338 332 aaKnown RBP1.79□□□□□ -2.12
CCDC93-209ENST00000488908 CLEC3BP05452 202 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 SUPT20HL2P0C7V6 817 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 JAK1P23458 1154 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 LMO2P25791 158 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 RGRP47804 291 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 DNA2P51530 1060 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 NDUFV3P56181 108 aaKnown RBP1.79□□□□□ -2.12
CCDC93-209ENST00000488908 RIPK4P57078 832 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 PRAMEP78395 509 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 TBCEQ15813 527 aaPredicted RBP1.79□□□□□ -2.12
CCDC93-209ENST00000488908 MARC1Q5VT66 337 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 ZNF530Q6P9A1 599 aaPredicted RBP1.79□□□□□ -2.12
CCDC93-209ENST00000488908 CLEC17AQ6ZS10 378 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 HEATR4Q86WZ0 1026 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 ANKRD42Q8N9B4 389 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 ESAMQ96AP7 390 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 RRP36Q96EU6 259 aaKnown RBP1.79□□□□□ -2.12
CCDC93-209ENST00000488908 ARPC5LQ9BPX5 153 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 PPIL3Q9H2H8 161 aaKnown RBP1.79□□□□□ -2.12
CCDC93-209ENST00000488908 LARSQ9P2J5 1176 aaKnown RBP1.79□□□□□ -2.12
CCDC93-209ENST00000488908 ZNF69Q9UC07 566 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 DGKBQ9Y6T7 804 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 R4GN57 208 aa1.79□□□□□ -2.12
CCDC93-209ENST00000488908 RSPH10B2B2RC85 870 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 PDHXO00330 501 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 O00370 1275 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 TSPAN1O60635 241 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 BCL10O95999 233 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 RSPH10BP0C881 870 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 VPREB1P12018 145 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 MYOGP15173 224 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 ELAVL4P26378 380 aaKnown RBP1.78□□□□□ -2.12
CCDC93-209ENST00000488908 CHRNA3P32297 505 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 SLC9A3P48764 834 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 RPL34P49207 117 aaKnown RBP1.78□□□□□ -2.12
CCDC93-209ENST00000488908 NDST2P52849 883 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 RHBDL3P58872 404 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 ERVK-16P61578 105 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 LINC00242Q5T6M2 205 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 C9orf66Q5T8R8 295 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 TMCO3Q6UWJ1 677 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 NOL8Q76FK4 1167 aaKnown RBP1.78□□□□□ -2.12
CCDC93-209ENST00000488908 OR7A2PQ8NGA2 310 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 OR4Q3Q8NH05 313 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 CHURC1Q8WUH1 139 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 ZNF799Q96GE5 643 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 NEK1Q96PY6 1258 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 PREBQ9HCU5 417 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 NLGN3Q9NZ94 848 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 IL17BQ9UHF5 180 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 COMMD10Q9Y6G5 202 aa1.78□□□□□ -2.12
CCDC93-209ENST00000488908 TLX2O43763 284 aaPredicted RBP1.77□□□□□ -2.13
CCDC93-209ENST00000488908 PRAMEF11O60813 436 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 CREG1O75629 220 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 OR2T7P0C7T2 308 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 HSPA1AP0DMV8 641 aaKnown RBP1.77□□□□□ -2.13
CCDC93-209ENST00000488908 HSPA1BP0DMV9 641 aaKnown RBP1.77□□□□□ -2.13
CCDC93-209ENST00000488908 GABRA5P31644 462 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 TRIM29Q14134 588 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 KIAA0141Q14154 515 aaPredicted RBP1.77□□□□□ -2.13
CCDC93-209ENST00000488908 CA9Q16790 459 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 LEMD1Q68G75 181 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 KIAA0930Q6ICG6 404 aaPredicted RBP1.77□□□□□ -2.13
CCDC93-209ENST00000488908 C11orf63Q6NUN7 778 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 ZCCHC12Q6PEW1 402 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 IGFL2Q6UWQ7 119 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 Q7L0L9 218 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 FCRLAQ7L513 359 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 HIPK1Q86Z02 1210 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 FAM89BQ8N5H3 189 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 PDILTQ8N807 584 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 OR4D10Q8NGI6 311 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 FAM20AQ96MK3 541 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 SCLT1Q96NL6 688 aa1.77□□□□□ -2.13
CCDC93-209ENST00000488908 HNRNPABQ99729 332 aaKnown RBP1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms