RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 BMPR1AP36894 532 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 NUDT6P53370 316 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 CRISP3P54108 245 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 SF1Q15637 639 aaKnown RBP11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 RNF219Q5W0B1 726 aaPredicted RBP11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 PDE12Q6L8Q7 609 aaKnown RBP11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 AKAP14Q86UN6 197 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 SYTL1Q8IYJ3 562 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 CAPSLQ8WWF8 208 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 ITPAQ9BY32 194 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 AASDHPPTQ9NRN7 309 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 HCSTQ9UBK5 93 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 AFF4Q9UHB7 1163 aaKnown RBP11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 ITGB1BP2Q9UKP3 347 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 MAN2B2Q9Y2E5 1009 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 CCDC88CQ9P219 2028 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 LOC100506127A0A0U1RQW1 187 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 AGAP5A6NIR3 686 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 CLDN24A6NM45 220 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 FKBP9O95302 570 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 KLKB1P03952 638 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 SEMG1P04279 462 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 IRF1P10914 325 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 EPB42P16452 691 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 IL1RNP18510 177 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 FPR1P21462 350 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 ARHGDIAP52565 204 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 CDH4P55283 916 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 CLDN8P56748 225 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 CDC20Q12834 499 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 NPRL3Q12980 569 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 RTN4RL1Q86UN2 441 aaPredicted RBP11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 SELENOMQ8WWX9 145 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 TPD52L3Q96J77 140 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 HOXD1Q9GZZ0 328 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 ASB8Q9H765 288 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 LATS2Q9NRM7 1088 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 GKN1Q9NS71 199 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 THUMPD1Q9NXG2 353 aaKnown RBP11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 TRPS1Q9UHF7 1281 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 RNF6Q9Y252 685 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 PCDHGA6Q9Y5G7 932 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 MTMR11A4FU01 709 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 M0R129 80 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 RFPL2O75678 378 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 NUDT7P0C024 238 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 EBLN1P0CF75 366 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 GKP32189 559 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 DUSP4Q13115 394 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 FADDQ13158 208 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 MTA1Q13330 715 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 CAMK2GQ13555 558 aaPredicted RBP11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 PLEKHG6Q3KR16 790 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 C5orf22Q49AR2 442 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 NCEH1Q6PIU2 408 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 TSPYL5Q86VY4 417 aaPredicted RBP11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 ZZZ3Q8IYH5 903 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 NLGN4XQ8N0W4 816 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 STK40Q8N2I9 435 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 CARNMT1Q8N4J0 409 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 CELF2-AS1Q8N7Q2 184 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 SLC38A4Q969I6 547 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 CLSTN3Q9BQT9 956 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 COPS4Q9BT78 406 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 NTMT1Q9BV86 223 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 SP140LQ9H930 580 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 CPNE5Q9HCH3 593 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 TMEM184CQ9NVA4 438 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 ASIC5Q9NY37 505 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 ERVW-1Q9UQF0 538 aa11.4□□□□□ -0.58
PDZRN3-203ENST00000462146 ALPK3Q96L96 1907 aa11.4□□□□□ -0.59
PDZRN3-203ENST00000462146 KCNK5O95279 499 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 COL6A1P12109 1028 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 ENGP17813 658 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 AQP1P29972 269 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 GJA8P48165 433 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 PPP3CCP48454 512 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 HNRNPFP52597 415 aaKnown RBP11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 DSC1Q08554 894 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 UBE2UQ5VVX9 321 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 PTOV1Q86YD1 416 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 CCDC103Q8IW40 242 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 CLECL1Q8IZS7 167 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 BEND7Q8N7W2 519 aaPredicted RBP11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 KIAA1958Q8N8K9 716 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 TXNDC15Q96J42 360 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 APOLD1Q96LR9 279 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 GPR62Q9BZJ7 368 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 TM6SF2Q9BZW4 377 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 OR51E2Q9H255 320 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 MARCH7Q9H992 704 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 KLHL3Q9UH77 587 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 PCDHB1Q9Y5F3 818 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 HSPE1-MOB4S4R3N1 261 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 K7ERQ8 282 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 WDR47O94967 919 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 ZNF7P17097 686 aaPredicted RBP11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 MZF1P28698 734 aaPredicted RBP11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 RGS4P49798 205 aa11.39□□□□□ -0.59
PDZRN3-203ENST00000462146 CYP4F2P78329 520 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms