RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 ZNF33BQ06732 778 aa16.32■□□□□ 0.2
UBE2D4-209ENST00000454428 ITIH4Q14624 930 aa16.32■□□□□ 0.2
UBE2D4-209ENST00000454428 LONRF1Q17RB8 773 aa16.32■□□□□ 0.2
UBE2D4-209ENST00000454428 SYTL3Q4VX76 610 aa16.32■□□□□ 0.2
UBE2D4-209ENST00000454428 ANKRD20A2Q5SQ80 823 aa16.32■□□□□ 0.2
UBE2D4-209ENST00000454428 ANKRD20A1Q5TYW2 823 aa16.32■□□□□ 0.2
UBE2D4-209ENST00000454428 ABHD17BQ5VST6 288 aa16.32■□□□□ 0.2
UBE2D4-209ENST00000454428 ANKRD20A3Q5VUR7 823 aa16.32■□□□□ 0.2
UBE2D4-209ENST00000454428 ITPRIPL1Q6GPH6 555 aa16.32■□□□□ 0.2
UBE2D4-209ENST00000454428 TMEM205Q6UW68 189 aa16.32■□□□□ 0.2
UBE2D4-209ENST00000454428 RNF44Q7L0R7 432 aa16.32■□□□□ 0.2
UBE2D4-209ENST00000454428 SIAH3Q8IW03 269 aa16.32■□□□□ 0.2
UBE2D4-209ENST00000454428 AMER3Q8N944 861 aa16.32■□□□□ 0.2
UBE2D4-209ENST00000454428 SIGLEC12Q96PQ1 595 aa16.32■□□□□ 0.2
UBE2D4-209ENST00000454428 A0A0J9YVX5 310 aa16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 KRT87PA6NCN2 255 aa16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 FAM227AF5H4B4 570 aa16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 QSOX1O00391 747 aa16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 RASGRF2O14827 1237 aa16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 TPH1P17752 444 aa16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 CXCR2P25025 360 aa16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 MARCKSL1P49006 195 aa16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 PLOD1Q02809 727 aaPredicted RBP16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 PRTGQ2VWP7 1150 aa16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 KRTCAP3Q53RY4 240 aa16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 FGD2Q7Z6J4 655 aa16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 DOLPP1Q86YN1 238 aa16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 MDS2Q8NDY4 140 aa16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 LKAAEAR1Q8TD35 194 aa16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 AGAP11Q8TF27 550 aa16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 PHF10Q8WUB8 498 aaKnown RBP16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 FRMD6Q96NE9 622 aa16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 TRIM51Q9BSJ1 452 aa16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 GOLPH3Q9H4A6 298 aa16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 PCDHGB6Q9Y5F9 930 aa16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 INTS1Q8N201 2190 aaKnown RBP16.31■□□□□ 0.2
UBE2D4-209ENST00000454428 ASPDHA6ND91 283 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 NPIPA5E9PKD4 350 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 H7C0C1 242 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 FANCGO15287 622 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 PSTPIP1O43586 416 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 GPC4O75487 556 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 UQCRHP07919 91 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 FOXN2P32314 431 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 SLC26A3P40879 764 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 ATP5OP48047 213 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 ST13P50502 369 aaKnown RBP16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 HSF1Q00613 529 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 DSG2Q14126 1118 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 C3P1Q6ZMU1 363 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 BBS12Q6ZW61 710 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 DCUN1D3Q8IWE4 304 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 RHOT2Q8IXI1 618 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 ARHGEF39Q8N4T4 335 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 NRGNQ92686 78 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 SCMH1Q96GD3 660 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 NPAS2Q99743 824 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 MIPEPQ99797 713 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 TGIF2Q9GZN2 237 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 NPDC1Q9NQX5 325 aaPredicted RBP16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 TRPC4Q9UBN4 977 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 FEZ2Q9UHY8 353 aaPredicted RBP16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 NPIPA1Q9UND3 350 aa16.3■□□□□ 0.2
UBE2D4-209ENST00000454428 FLNAP21333 2647 aaKnown RBP16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 A0A1W2PPV9 198 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 APOC4-APOC2K7ER74 178 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 SPOPO43791 374 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 APOC2P02655 101 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 EIF2S1P05198 315 aaKnown RBP16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 HEXBP07686 556 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 SNRPNP63162 240 aaKnown RBP16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 TUBA3CQ13748 450 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 SYT16Q17RD7 645 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 MUM1Q2TAK8 710 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 CCSMST1Q4G0I0 132 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 KCTD11Q693B1 232 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 FCRLBQ6BAA4 426 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 H3F3CQ6NXT2 135 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 FBXO42Q6P3S6 717 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 TUBA3EQ6PEY2 450 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 CCDC50Q8IVM0 306 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 ZC3H7AQ8IWR0 971 aaKnown RBP16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 KATNAL2Q8IYT4 538 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 SHISA5Q8N114 240 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 BEST3Q8N1M1 668 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 OR2L3Q8NG85 312 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 OR2A1Q8NGT9 310 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 CFAP61Q8NHU2 1237 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 STYXQ8WUJ0 223 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 SDCCAG3Q96C92 435 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 IQCDQ96DY2 449 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 HEMGNQ9BXL5 484 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 CXXC4Q9H2H0 198 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 C14orf105Q9NVL8 296 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 ASB1Q9Y576 335 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 FAM169AQ9Y6X4 670 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 AKAP6Q13023 2319 aa16.29■□□□□ 0.2
UBE2D4-209ENST00000454428 CCDC162PA2VCL2 907 aa16.28■□□□□ 0.2
UBE2D4-209ENST00000454428 FAM221AA4D161 298 aa16.28■□□□□ 0.2
UBE2D4-209ENST00000454428 OR2A25A4D2G3 310 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms