RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ARMC3Q5W041 872 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 THOC7Q6I9Y2 204 aaKnown RBP4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 ZNF549Q6P9A3 640 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 PPP1R21Q6ZMI0 780 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 G2E3Q7L622 706 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 APTXQ7Z2E3 356 aaKnown RBP4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 PIGWQ7Z7B1 504 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 TMEM110Q86TL2 294 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 ZNF589Q86UQ0 364 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 VPS36Q86VN1 386 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 CHERPQ8IWX8 916 aaKnown RBP4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 PCDH20Q8N6Y1 951 aaKnown RBP4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 SYT2Q8N9I0 419 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 KBTBD3Q8NAB2 608 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 HM13Q8TCT9 377 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 NELFBQ8WX92 580 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 TAAR8Q969N4 342 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 AZIN2Q96A70 460 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 MCUR1Q96AQ8 359 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 RHBDF1Q96CC6 855 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 TLCD1Q96CP7 247 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 ABHD8Q96I13 439 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 CEP295NLQ96MC4 621 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 DACH2Q96NX9 599 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 KRT12Q99456 494 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 PAFAH2Q99487 392 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 SPATA16Q9BXB7 569 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 Q9H521 79 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 PCDH9Q9HC56 1237 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 NOX4Q9NPH5 578 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 SLC35C2Q9NQQ7 365 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 NMRK1Q9NWW6 199 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 NKIRAS1Q9NYS0 192 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 DNAJB4Q9UDY4 337 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 DBNLQ9UJU6 430 aaKnown RBP4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 BARX2Q9UMQ3 279 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 MAGED1Q9Y5V3 778 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 TRIP12Q14669 1992 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 NRXN3Q9Y4C0 1643 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 PTPRUQ92729 1446 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 METP08581 1390 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 TTC26A0AVF1 554 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 LINC01553A4QN01 128 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 TMEM8BA6NDV4 472 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 TMEM221A6NGB7 291 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 F8VZ95 297 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 GOLGA8TH3BQL2 631 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 HS3ST1O14792 307 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 ADAMDEC1O15204 470 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 KCNN4O15554 427 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 ZBTB43O43298 467 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 RANBP6O60518 1105 aaKnown RBP4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 PEX11AO75192 247 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 PDE5AO76074 875 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 DDNO94850 711 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 ZWINTO95229 277 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 LCA5LO95447 670 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 GH2P01242 217 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 PRSS2P07478 247 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 KRT16P08779 473 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 GOLGA8HP0CJ92 632 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 TPBGLP0DKB5 382 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 GNAZP19086 355 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 POLR2EP19388 210 aaKnown RBP4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 UGT1A1P22309 533 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 MARK3P27448 753 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 PHBP35232 272 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 APOBEC1P41238 236 aaKnown RBP4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 MTIF2P46199 727 aaKnown RBP4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 POLGP54098 1239 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 TAS2R38P59533 333 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 KCNJ2P63252 427 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 XIAPP98170 497 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 CXCL9Q07325 125 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 TNFAIP1Q13829 316 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 DHX34Q14147 1143 aaKnown RBP4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 OASLQ15646 514 aaKnown RBP4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 HLFQ16534 295 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 NDUFA5Q16718 116 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 ZNF260Q3ZCT1 412 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 CCDC153Q494R4 210 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 LIN52Q52LA3 116 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 PAPPA-AS1Q5QFB9 102 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 NSUN5P2Q63ZY6 315 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 OR52E8Q6IFG1 317 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 LCN10Q6JVE6 187 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 ZNF280DQ6N043 979 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 FAM122CQ6P4D5 195 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 WDR73Q6P4I2 378 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 LRRC74BQ6ZQY2 392 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 CCDC190Q86UF4 302 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 NRROSQ86YC3 692 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 CLIP4Q8N3C7 705 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 MINDY1Q8N5J2 469 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 AVL9Q8NBF6 648 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 APPL2Q8NEU8 664 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 ZNF317Q96PQ6 595 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 GCNAQ96QF7 691 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 APOL6Q9BWW8 343 aa4.31□□□□□ -1.72
HMGB1P16-201ENST00000447155 PUS3Q9BZE2 481 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms