RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 SRMSQ9H3Y6 488 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 SOHLH2Q9NX45 425 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 M0R3G1 203 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 PDLIM1O00151 329 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 HTRA2O43464 458 aaPredicted RBP13.63□□□□□ -0.23
SCAF4-202ENST00000399804 STATHP02808 62 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 AKT2P31751 481 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 RXRGP48443 463 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 HSPB3Q12988 150 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 NFE2L1Q14494 772 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 NOXRED1Q6NXP6 359 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 ZNF438Q7Z4V0 828 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 ZNF683Q8IZ20 524 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 SRFBP1Q8NEF9 429 aaKnown RBP13.63□□□□□ -0.23
SCAF4-202ENST00000399804 TSPEARQ8WU66 669 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 PNPLA3Q9NST1 481 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 FBXW2Q9UKT8 454 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 TMED5Q9Y3A6 229 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 ARID2Q68CP9 1835 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 SCN10AQ9Y5Y9 1956 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 SBF1O95248 1867 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 PLXNA1Q9UIW2 1896 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 PFDN1O60925 122 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 VNN2O95498 520 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 SERPINA1P01009 418 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 PTSQ03393 145 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 FOXM1Q08050 763 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 PPP1R8Q12972 351 aaKnown RBP13.63□□□□□ -0.23
SCAF4-202ENST00000399804 DYNC1I2Q13409 638 aaKnown RBP13.63□□□□□ -0.23
SCAF4-202ENST00000399804 CCNIQ14094 377 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 SLC5A9Q2M3M2 681 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 GPAT3Q53EU6 434 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 ANKRD26P1Q6NSI1 321 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 LARP4Q71RC2 724 aaKnown RBP eCLIP13.63□□□□□ -0.233e-9■■□□□ 13.6
SCAF4-202ENST00000399804 CLVS1Q8IUQ0 354 aaPredicted RBP13.63□□□□□ -0.23
SCAF4-202ENST00000399804 NRSN1Q8IZ57 195 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 OFCC1Q8IZS5 231 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 BPIFB6Q8NFQ5 453 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 USP7Q93009 1102 aa13.63□□□□□ -0.23
SCAF4-202ENST00000399804 MRPS30Q9NP92 439 aaKnown RBP13.63□□□□□ -0.23
SCAF4-202ENST00000399804 FARSBQ9NSD9 589 aaKnown RBP13.63□□□□□ -0.23
SCAF4-202ENST00000399804 INTS7Q9NVH2 962 aaKnown RBP13.63□□□□□ -0.23
SCAF4-202ENST00000399804 H2AFY2Q9P0M6 372 aaPredicted RBP13.63□□□□□ -0.23
SCAF4-202ENST00000399804 hCG_2014768A0A024R1R8 64 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 H3BNC9 293 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 SLC28A2O43868 658 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 ZNF8P17098 575 aaPredicted RBP13.62□□□□□ -0.23
SCAF4-202ENST00000399804 CAPN3P20807 821 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 RPS9P46781 194 aaKnown RBP13.62□□□□□ -0.23
SCAF4-202ENST00000399804 ACVR1Q04771 509 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 TMED1Q13445 227 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 KCNC3Q14003 757 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 TANGO2Q6ICL3 276 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 C16orf87Q6PH81 154 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 LKAAEAR1Q8TD35 194 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 ABTB1Q969K4 478 aaPredicted RBP13.62□□□□□ -0.23
SCAF4-202ENST00000399804 ZNF419Q96HQ0 510 aaPredicted RBP13.62□□□□□ -0.23
SCAF4-202ENST00000399804 CEP19Q96LK0 163 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 EQTNQ9NQ60 294 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 OR1A2Q9Y585 309 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 ZNF780BQ9Y6R6 833 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 LOC285556D6RIA3 1793 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 PRORSD1PA6NEY8 169 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 H7C0S8 307 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 CCNDBP1O95273 360 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 BMP10O95393 424 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 C1SP09871 688 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 CDH1P12830 882 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 ENGP17813 658 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 HSD17B2P37059 387 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 RPL5P46777 297 aaKnown RBP13.62□□□□□ -0.23
SCAF4-202ENST00000399804 INHBCP55103 352 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 PHF10Q8WUB8 498 aaKnown RBP13.62□□□□□ -0.23
SCAF4-202ENST00000399804 TMEM245Q9H330 911 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 XKR8Q9H6D3 395 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 SDR39U1Q9NRG7 319 aaPredicted RBP13.62□□□□□ -0.23
SCAF4-202ENST00000399804 H7BY64 318 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 DFNA5O60443 496 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 C1QAP02745 245 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 CYP4B1P13584 511 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 GPNMBQ14956 572 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 SPIN4Q56A73 249 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 NPAS3Q8IXF0 933 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 ZNF689Q96CS4 500 aaPredicted RBP13.62□□□□□ -0.23
SCAF4-202ENST00000399804 DACH2Q96NX9 599 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 PRAP1Q96NZ9 151 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 RAB26Q9ULW5 256 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 DUSP12Q9UNI6 340 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 hCG_2039718K7EN88 272 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 VEGFDO43915 354 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 ITGB8P26012 769 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 MAPK10P53779 464 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 GRIK2Q13002 908 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 LIPJQ5W064 366 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 TRPV3Q8NET8 790 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 OR10Q1Q8NGQ4 319 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 GLMNQ92990 594 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 ARMC5Q96C12 935 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 GULP1Q9UBP9 304 aa13.62□□□□□ -0.23
SCAF4-202ENST00000399804 OAZ3Q9UMX2 235 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms