RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 KRT6BP04259 564 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 ACADSP16219 412 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 ATP6V1C1P21283 382 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 KRT6CP48668 564 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 HMGCS1Q01581 520 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 DMWDQ09019 674 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 TRAP1Q12931 704 aaKnown RBP21.92■■□□□ 1.1
CDX1-201ENST00000231656 SGO1Q5FBB7 561 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 ZFP1Q6P2D0 407 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 XKR5Q6UX68 686 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 KLHDC8AQ8IYD2 350 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 CFAP206Q8IYR0 622 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 LRRC58Q96CX6 371 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 ORAI3Q9BRQ5 295 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 PSMD13Q9UNM6 376 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 MGAT4DA6NG13 374 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 NME4O00746 187 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 LIN7AO14910 233 aaPredicted RBP21.92■■□□□ 1.1
CDX1-201ENST00000231656 PRAMEF4O60810 478 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 SLC2A4P14672 509 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 ITPKAP23677 461 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 MAP4P27816 1152 aaKnown RBP21.92■■□□□ 1.1
CDX1-201ENST00000231656 MAPK9P45984 424 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 RPL38P63173 70 aaKnown RBP21.92■■□□□ 1.1
CDX1-201ENST00000231656 MRPS22P82650 360 aaKnown RBP21.92■■□□□ 1.1
CDX1-201ENST00000231656 NFATC4Q14934 902 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 USP39Q53GS9 565 aaKnown RBP21.92■■□□□ 1.1
CDX1-201ENST00000231656 PAGE3Q5JUK9 113 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 PRAMEF9Q5VWM5 478 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 ABI3BPQ7Z7G0 1075 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 AMZ2Q86W34 360 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 RGL4Q8IZJ4 473 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 CADM4Q8NFZ8 388 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 HM13Q8TCT9 377 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 SNX19Q92543 992 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 SPACA7Q96KW9 195 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 ATG10Q9H0Y0 220 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 PCDHAC1Q9H158 963 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 PCED1AQ9H1Q7 454 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 RMI1Q9H9A7 625 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 TM7SF3Q9NS93 570 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 ASIC5Q9NY37 505 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 SLC23A2Q9UGH3 650 aa21.92■■□□□ 1.1
CDX1-201ENST00000231656 LEF1Q9UJU2 399 aaPredicted RBP21.92■■□□□ 1.1
CDX1-201ENST00000231656 DNMT3AQ9Y6K1 912 aaPredicted RBP21.92■■□□□ 1.1
CDX1-201ENST00000231656 METTL12A8MUP2 240 aa21.91■■□□□ 1.1
CDX1-201ENST00000231656 KMOO15229 486 aa21.91■■□□□ 1.1
CDX1-201ENST00000231656 CATP04040 527 aaKnown RBP21.91■■□□□ 1.1
CDX1-201ENST00000231656 JAK1P23458 1154 aa21.91■■□□□ 1.1
CDX1-201ENST00000231656 SLC6A2P23975 617 aa21.91■■□□□ 1.1
CDX1-201ENST00000231656 PDHA2P29803 388 aa21.91■■□□□ 1.1
CDX1-201ENST00000231656 GNPDA1P46926 289 aa21.91■■□□□ 1.1
CDX1-201ENST00000231656 ATXN3P54252 364 aaPredicted RBP21.91■■□□□ 1.1
CDX1-201ENST00000231656 YPEL5P62699 121 aa21.91■■□□□ 1.1
CDX1-201ENST00000231656 PRKG2Q13237 762 aa21.91■■□□□ 1.1
CDX1-201ENST00000231656 CAPRIN1Q14444 709 aaKnown RBP21.91■■□□□ 1.1
CDX1-201ENST00000231656 CPSF6Q16630 551 aaKnown RBP eCLIP21.91■■□□□ 1.1
CDX1-201ENST00000231656 CCSMST1Q4G0I0 132 aa21.91■■□□□ 1.1
CDX1-201ENST00000231656 C6orf10Q5SRN2 563 aa21.91■■□□□ 1.1
CDX1-201ENST00000231656 TPRG1LQ5T0D9 272 aa21.91■■□□□ 1.1
CDX1-201ENST00000231656 TSSK4Q6SA08 328 aa21.91■■□□□ 1.1
CDX1-201ENST00000231656 SLC15A3Q8IY34 581 aa21.91■■□□□ 1.1
CDX1-201ENST00000231656 OXR1Q8N573 874 aa21.91■■□□□ 1.1
CDX1-201ENST00000231656 DEFB119Q8N690 84 aa21.91■■□□□ 1.1
CDX1-201ENST00000231656 SCARF2Q96GP6 870 aaPredicted RBP21.91■■□□□ 1.1
CDX1-201ENST00000231656 CCDC138Q96M89 665 aa21.91■■□□□ 1.1
CDX1-201ENST00000231656 LRTM1Q9HBL6 345 aa21.91■■□□□ 1.1
CDX1-201ENST00000231656 FGF22Q9HCT0 170 aa21.91■■□□□ 1.1
CDX1-201ENST00000231656 SUFUQ9UMX1 484 aa21.91■■□□□ 1.1
CDX1-201ENST00000231656 DYTNA2CJ06 578 aa21.9■■□□□ 1.1
CDX1-201ENST00000231656 TMEM221A6NGB7 291 aa21.9■■□□□ 1.1
CDX1-201ENST00000231656 M0R296 226 aa21.9■■□□□ 1.1
CDX1-201ENST00000231656 PDYNP01213 254 aa21.9■■□□□ 1.1
CDX1-201ENST00000231656 HOXA6P31267 233 aa21.9■■□□□ 1.1
CDX1-201ENST00000231656 BDKRB1P46663 353 aa21.9■■□□□ 1.1
CDX1-201ENST00000231656 RPL6Q02878 288 aaKnown RBP21.9■■□□□ 1.1
CDX1-201ENST00000231656 MAD2L1Q13257 205 aaPredicted RBP21.9■■□□□ 1.1
CDX1-201ENST00000231656 NFE2L1Q14494 772 aa21.9■■□□□ 1.1
CDX1-201ENST00000231656 TIGD2Q4W5G0 525 aa21.9■■□□□ 1.1
CDX1-201ENST00000231656 RSRC1Q96IZ7 334 aaKnown RBP21.9■■□□□ 1.1
CDX1-201ENST00000231656 ACPTQ9BZG2 426 aa21.9■■□□□ 1.1
CDX1-201ENST00000231656 CMTM6Q9NX76 183 aa21.9■■□□□ 1.1
CDX1-201ENST00000231656 STOX2Q9P2F5 926 aaPredicted RBP21.9■■□□□ 1.1
CDX1-201ENST00000231656 GMPR2Q9P2T1 348 aaKnown RBP21.9■■□□□ 1.1
CDX1-201ENST00000231656 MOSPD1Q9UJG1 213 aa21.9■■□□□ 1.1
CDX1-201ENST00000231656 EIF3LQ9Y262 564 aaKnown RBP21.9■■□□□ 1.1
CDX1-201ENST00000231656 CASQ2O14958 399 aaPredicted RBP21.89■■□□□ 1.1
CDX1-201ENST00000231656 RSL1D1O76021 490 aaKnown RBP21.89■■□□□ 1.1
CDX1-201ENST00000231656 KELP23276 732 aa21.89■■□□□ 1.1
CDX1-201ENST00000231656 HTR1BP28222 390 aa21.89■■□□□ 1.1
CDX1-201ENST00000231656 YBX1P67809 324 aaKnown RBP21.89■■□□□ 1.1
CDX1-201ENST00000231656 NFYCQ13952 458 aa21.89■■□□□ 1.1
CDX1-201ENST00000231656 IMPG1Q17R60 797 aa21.89■■□□□ 1.1
CDX1-201ENST00000231656 ENPP7Q6UWV6 458 aa21.89■■□□□ 1.1
CDX1-201ENST00000231656 FAM83HQ6ZRV2 1179 aaPredicted RBP21.89■■□□□ 1.1
CDX1-201ENST00000231656 Q6ZSR6 202 aa21.89■■□□□ 1.1
CDX1-201ENST00000231656 PQLC1Q8N2U9 271 aa21.89■■□□□ 1.1
CDX1-201ENST00000231656 OR13H1Q8NG92 308 aa21.89■■□□□ 1.1
CDX1-201ENST00000231656 ATL1Q8WXF7 558 aa21.89■■□□□ 1.1
CDX1-201ENST00000231656 WDR92Q96MX6 357 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms