RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Nck1Q99M51 377 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 MINDY3Q9CV28 444 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Ndufaf4Q9D1H6 173 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Plscr3Q9JIZ9 296 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 PnckQ9QYK9 343 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Sae1Q9R1T2 350 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Clic1Q9Z1Q5 241 aaKnown RBP14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Brca2P97929 3329 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Rev3lQ61493 3122 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Gm28729A0A1B0GSW2 409 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Gm13088A2AGW6 460 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Vmn2r114E9Q281 856 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Obox5G3X9P6 291 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Rpl10lP86048 214 aaKnown RBP14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Bpifa1P97361 278 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Taar7fQ5QD08 358 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Rpl10Q6ZWV3 214 aaKnown RBP14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Znf569Q80W31 679 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Fam83eQ80XS7 481 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Q810N5 247 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Zbtb46Q8BID6 600 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Trmt2bQ8BQJ6 493 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 MdficQ8BX65 247 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 C1rbQ8CFG9 706 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 DhddsQ99KU1 333 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Gm26657Q9CVR1 127 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Psmd8Q9CX56 353 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Olfr701Q9D3U9 316 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Poc5Q9DBS8 558 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Ndufs3Q9DCT2 263 aaKnown RBP14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Psmd13Q9WVJ2 376 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Ate1Q9Z2A5 516 aa14.37□□□□□ -0.11
Nup88-202ENSMUST00000108530 Itga8A2ARA8 1062 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Olfr1253A2AUA2 318 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Mup18A2BIM8 181 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Gnpda1O88958 289 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Mup11P04938 181 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Csf3rP40223 837 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Rps14P62264 151 aaKnown RBP14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Lhx1P63006 406 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Col28a1Q2UY11 1141 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Krt2Q3TTY5 707 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Gm21320Q4FZE8 181 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 TifaQ793I8 184 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Olfr1251Q7TQZ3 318 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Chrnb3Q8BMN3 464 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Golm1Q91XA2 393 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Trim33Q99PP7 1142 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Bcas2Q9D287 225 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Atp5oQ9DB20 213 aaKnown RBP14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Vnn3Q9QZ25 500 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 PtsQ9R1Z7 144 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Rrn3B2RS91 656 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Vmn2r6H3BK29 913 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Grpel2O88396 224 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 GhrP16882 650 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 C2P21180 760 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Shcbp1lQ3TTP0 639 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 ClyblQ8R4N0 338 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Micu1Q8VCX5 477 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Cxxc5Q91WA4 317 aaKnown RBP14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 EtfdhQ921G7 616 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Hhipl2Q9D2G9 717 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Zswim2Q9D9X6 631 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 H2-BlV9GXR0 257 aa14.36□□□□□ -0.11
Nup88-202ENSMUST00000108530 Ccdc120A2AEV7 629 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Vmn2r7E9PYL5 915 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Krt90E9Q1Z0 538 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Zfp809G3X9G7 402 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Vmn2r3H3BJ88 915 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Olfr1513L7N457 313 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Alox8O35936 677 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Psmd3P14685 530 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Fcgr1P26151 404 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Gfi1P70338 423 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Ezh1P70351 747 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Apcdd1Q3U128 514 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Pitpnm3Q3UHE1 974 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Foxs1Q61574 329 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Mep1bQ61847 704 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Slc13a5Q67BT3 572 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Dcaf13Q6PAC3 445 aaKnown RBP14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Olfr1313Q7TQW8 311 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 SheQ8BSD5 492 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Cops7bQ8BV13 264 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Parp12Q8BZ20 711 aaKnown RBP14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 CenpiQ8K1K4 746 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Plcl2Q8K394 1128 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Defb35Q8R2I3 63 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Ntmt1Q8R2U4 223 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 TrehQ9JLT2 576 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Fem1aaQ9Z2G1 654 aa14.35□□□□□ -0.11
Nup88-202ENSMUST00000108530 Gm28043E0CXC2 719 aa14.34□□□□□ -0.11
Nup88-202ENSMUST00000108530 Vmn2r120E9PX34 856 aa14.34□□□□□ -0.11
Nup88-202ENSMUST00000108530 Xkr6E9Q6C8 638 aa14.34□□□□□ -0.11
Nup88-202ENSMUST00000108530 Fam71e2L7N480 754 aa14.34□□□□□ -0.11
Nup88-202ENSMUST00000108530 Capn5O08688 640 aaKnown RBP14.34□□□□□ -0.11
Nup88-202ENSMUST00000108530 Mid1O70583 680 aa14.34□□□□□ -0.11
Nup88-202ENSMUST00000108530 Zfp1P08042 402 aa14.34□□□□□ -0.11
Nup88-202ENSMUST00000108530 Hoxb3P09026 433 aa14.34□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 53.8 ms