RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, human

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX41-215	ENST00000512431		E9PLN8	166 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431		F8W8V4	182 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	PRRG2	O14669	202 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	RASGRF2	O14827	1237 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	CST8	O60676	142 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	TSPAN12	O95859	305 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	EIF2S1	P05198	315 aa	Known RBP	11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	ERVK-10	P10266	1014 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	ITGAM	P11215	1152 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	EEF1D	P29692	281 aa	Known RBP	11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	PRPSAP1	Q14558	356 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	MUM1	Q2TAK8	710 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	LRRC38	Q5VT99	294 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	CES4A	Q5XG92	561 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	KAZN	Q674X7	775 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	ITPRIPL1	Q6GPH6	555 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	RANBP10	Q6VN20	620 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	NEK10	Q6ZWH5	1172 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	LAPTM4B	Q86VI4	370 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	TGIF2LY	Q8IUE0	185 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	TAB3	Q8N5C8	712 aa	Predicted RBP	11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	C2orf73	Q8N5S3	287 aa	Predicted RBP	11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	ACBD4	Q8NC06	268 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	FAM98A	Q8NCA5	519 aa	Known RBP	11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	AGAP11	Q8TF27	550 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	ZNF285	Q96NJ3	590 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	TREX2	Q9BQ50	279 aa	Predicted RBP	11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	VKORC1	Q9BQB6	163 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	APOL2	Q9BQE5	337 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	ZNF559	Q9BR84	538 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	GBA3	Q9H227	469 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	C14orf105	Q9NVL8	296 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	SLC39A10	Q9ULF5	831 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	PPT2	Q9UMR5	302 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	NPIPA1	Q9UND3	350 aa		11.96	□□□□□ -0.49
DDX41-215	ENST00000512431	NIPBL	Q6KC79	2804 aa	eCLIP	11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	IGLV3-12	A0A075B6K2	115 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	TRBV5-4	A0A0C4DH59	114 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431		A0A1B0GTH6	734 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431		A0A1W2PQ72	361 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431		A8MUI8	341 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	HACD1	B0YJ81	288 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	CCL22	O00626	93 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	ASNA1	O43681	348 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	WISP2	O76076	250 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	FKBP9	O95302	570 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	SERPINC1	P01008	464 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	CELA2A	P08217	269 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	OR56A5	P0C7T3	313 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	TNNT1	P13805	278 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	PECAM1	P16284	738 aa	Predicted RBP	11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	KLK2	P20151	261 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	DNAJA1	P31689	397 aa	Known RBP	11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	ZNF140	P52738	457 aa	Predicted RBP	11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	ZBED6	P86452	979 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	OLIG2	Q13516	323 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	DNAJC21	Q5F1R6	531 aa	Known RBP	11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	TTC23L	Q6PF05	361 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	MFSD7	Q6UXD7	560 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	TAX1BP1	Q86VP1	789 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	GHDC	Q8N2G8	530 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	DTWD1	Q8N5C7	304 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	LINC01555	Q8NAE3	123 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	ZNF354B	Q96LW1	612 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	ALS2CR12	Q96Q35	445 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	TUBB6	Q9BUF5	446 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	ZNF700	Q9H0M5	742 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	TRPC4	Q9UBN4	977 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	TNFRSF10D	Q9UBN6	386 aa		11.95	□□□□□ -0.5
DDX41-215	ENST00000512431	SLC5A10	A0PJK1	596 aa		11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	RCCD1	A6NED2	376 aa		11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	ANXA5	P08758	320 aa		11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	CD46	P15529	392 aa		11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	IST1	P53990	364 aa		11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	NAPRT	Q6XQN6	538 aa		11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	DOLPP1	Q86YN1	238 aa		11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	RAB42	Q8N4Z0	105 aa		11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	HORMAD2	Q8N7B1	307 aa		11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	TMEM178A	Q8NBL3	297 aa		11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	OR2L8	Q8NGY9	312 aa		11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	SLC35G2	Q8TBE7	412 aa		11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	METTL21A	Q8WXB1	218 aa		11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	DNAJC1	Q96KC8	554 aa	Known RBP	11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	CABS1	Q96KC9	395 aa		11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	FOXC2	Q99958	501 aa		11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	UTP23	Q9BRU9	249 aa	Known RBP	11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	TMEM121	Q9BTD3	319 aa		11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	RAB11FIP5	Q9BXF6	653 aa		11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	SLC24A3	Q9HC58	644 aa		11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	KLHL1	Q9NR64	748 aa		11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.94	□□□□□ -0.5
DDX41-215	ENST00000512431	NCOA6	Q14686	2063 aa	Predicted RBP	11.93	□□□□□ -0.5
DDX41-215	ENST00000512431	LOC102723996	A0A087X1L8	192 aa		11.93	□□□□□ -0.5
DDX41-215	ENST00000512431		A0A0J9YVX5	310 aa		11.93	□□□□□ -0.5
DDX41-215	ENST00000512431	TMEM200C	A6NKL6	621 aa		11.93	□□□□□ -0.5
DDX41-215	ENST00000512431		H7C0S8	307 aa		11.93	□□□□□ -0.5

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