RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 KRT8P05787 483 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 POLR2MP0CAP2 368 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 OPN1MW2P0DN77 364 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 OPN1MW3P0DN78 364 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 SLC2A3P11169 496 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 ETS2P15036 469 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 TCP1P17987 556 aaKnown RBP4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 ITIH1P19827 911 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 RAB4AP20338 218 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 CCNE1P24864 410 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 KLRK1P26718 216 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 PON1P27169 355 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 STX2P32856 288 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 ETV5P41161 510 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 GARSP41250 739 aaKnown RBP4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 NR1H2P55055 460 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 SLC37A1P57057 533 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 NLRP11P59045 1033 aaKnown RBP4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 TAS2R50P59544 299 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 BNC1Q01954 994 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 SRSF1Q07955 248 aaKnown RBP eCLIP4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 PLD1Q13393 1074 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 ACVR2BQ13705 512 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 HNRNPDQ14103 355 aaKnown RBP4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 DOC2AQ14183 400 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 KRT32Q14532 448 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 POU6F1Q14863 301 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 MAPK6Q16659 721 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 DUSP7Q16829 419 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 LRIT3Q3SXY7 679 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 BRMS1LQ5PSV4 323 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 MANEAQ5SRI9 462 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 HES5Q5TA89 166 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 AGAP7PQ5VUJ5 663 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 FAM205BPQ63HN1 556 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 C16orf89Q6UX73 402 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 UTS2BQ765I0 119 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 SETD3Q86TU7 594 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 TLK2Q86UE8 772 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 IGFN1Q86VF2 1251 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 HPS6Q86YV9 775 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 TMEM139Q8IV31 216 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 ADGRF2Q8IZF7 708 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 OR4N4Q8N0Y3 316 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 CENPSQ8N2Z9 138 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 ANKRD13CQ8N6S4 541 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 PLD5Q8N7P1 536 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 ASCC1Q8N9N2 400 aaKnown RBP4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 OR52N4Q8NGI2 321 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 STYXQ8WUJ0 223 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 ASZ1Q8WWH4 475 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 PRCCQ92733 491 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 MTBPQ96DY7 904 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 C19orf60Q96EN9 201 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 ZNF486Q96H40 463 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 PRICKLE1Q96MT3 831 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 TWNKQ96RR1 684 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 PIGSQ96S52 555 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 PIP5K1AQ99755 562 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 FSD1Q9BTV5 496 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 DDX23Q9BUQ8 820 aaKnown RBP4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 TRIM62Q9BVG3 475 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 SORBS1Q9BX66 1292 aaKnown RBP4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 TDRD1Q9BXT4 1180 aaKnown RBP4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 STN1Q9H668 368 aaKnown RBP4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 SLA2Q9H6Q3 261 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 RMND5AQ9H871 391 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 AGO4Q9HCK5 861 aaKnown RBP4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 S100A14Q9HCY8 104 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 ITM2CQ9NQX7 267 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 C20orf96Q9NUD7 363 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 NYAP2Q9P242 653 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 ANKMY1Q9P2S6 941 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 CPSF3Q9UKF6 684 aaKnown RBP4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 GINS2Q9Y248 185 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 PXDNLA1KZ92 1463 aa4.56□□□□□ -1.68
HMGB3P13-201ENST00000511263 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 GSTTP1A0A1W2PQM5 241 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 SLC22A23A1A5C7 686 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 EIF4E1BA6NMX2 242 aaKnown RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 A8MX80 341 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 H0YCG3 227 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 H0YIN7 160 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 TRIM77I1YAP6 450 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 K7EPI3 171 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 NDUFS8O00217 210 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 CCRL2O00421 344 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 TRAFD1O14545 582 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 CHMP2AO43633 222 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 TNFAIP8O95379 198 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 PLGP00747 810 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 HLA-DQA2P01906 255 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 MT-ND3P03897 115 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 RB1P06400 928 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 TFPTP0C1Z6 253 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 THEGLP0DJG4 465 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 POU2F1P14859 743 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 ALOX12P18054 663 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 IGFBP2P18065 325 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 CXCR2P25025 360 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms