RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 AGAP7PQ5VUJ5 663 aa1.84□□□□□ -2.11
CCDC93-209ENST00000488908 GARNL3Q5VVW2 1013 aa1.84□□□□□ -2.11
CCDC93-209ENST00000488908 JADE1Q6IE81 842 aa1.84□□□□□ -2.11
CCDC93-209ENST00000488908 ACAD10Q6JQN1 1059 aa1.84□□□□□ -2.11
CCDC93-209ENST00000488908 NUDT13Q86X67 352 aa1.84□□□□□ -2.11
CCDC93-209ENST00000488908 SLC37A3Q8NCC5 494 aa1.84□□□□□ -2.11
CCDC93-209ENST00000488908 OR2AJ1Q8NGZ0 328 aa1.84□□□□□ -2.11
CCDC93-209ENST00000488908 FAM218AQ96MZ4 157 aa1.84□□□□□ -2.11
CCDC93-209ENST00000488908 DPAGT1Q9H3H5 408 aa1.84□□□□□ -2.11
CCDC93-209ENST00000488908 PAG1Q9NWQ8 432 aa1.84□□□□□ -2.11
CCDC93-209ENST00000488908 SLC13A4Q9UKG4 626 aa1.84□□□□□ -2.11
CCDC93-209ENST00000488908 TRIM17Q9Y577 477 aa1.84□□□□□ -2.11
CCDC93-209ENST00000488908 A0A1W2PPH5 198 aa1.83□□□□□ -2.12
CCDC93-209ENST00000488908 E9PAM4 449 aa1.83□□□□□ -2.12
CCDC93-209ENST00000488908 NPIPB9F8W1W9 429 aa1.83□□□□□ -2.12
CCDC93-209ENST00000488908 XRCC3O43542 346 aa1.83□□□□□ -2.12
CCDC93-209ENST00000488908 NXPH4O95158 308 aa1.83□□□□□ -2.12
CCDC93-209ENST00000488908 PRLRP16471 622 aa1.83□□□□□ -2.12
CCDC93-209ENST00000488908 CDH2P19022 906 aaPredicted RBP1.83□□□□□ -2.12
CCDC93-209ENST00000488908 CAMPP49913 170 aa1.83□□□□□ -2.12
CCDC93-209ENST00000488908 TPD52P55327 224 aaPredicted RBP1.83□□□□□ -2.12
CCDC93-209ENST00000488908 FKBP3Q00688 224 aaKnown RBP1.83□□□□□ -2.12
CCDC93-209ENST00000488908 IKQ13123 557 aaPredicted RBP1.83□□□□□ -2.12
CCDC93-209ENST00000488908 NR1D2Q14995 579 aa1.83□□□□□ -2.12
CCDC93-209ENST00000488908 UTF1Q5T230 341 aa1.83□□□□□ -2.12
CCDC93-209ENST00000488908 GKAP1Q5VSY0 366 aaPredicted RBP1.83□□□□□ -2.12
CCDC93-209ENST00000488908 WSCD1Q658N2 575 aa1.83□□□□□ -2.12
CCDC93-209ENST00000488908 NCEH1Q6PIU2 408 aa1.83□□□□□ -2.12
CCDC93-209ENST00000488908 R3HCC1LQ7Z5L2 792 aaKnown RBP1.83□□□□□ -2.12
CCDC93-209ENST00000488908 MCEMP1Q8IX19 187 aa1.83□□□□□ -2.12
CCDC93-209ENST00000488908 C4orf32Q8N8J7 132 aa1.83□□□□□ -2.12
CCDC93-209ENST00000488908 TDRD5Q8NAT2 981 aaKnown RBP1.83□□□□□ -2.12
CCDC93-209ENST00000488908 SSC4DQ8WTU2 575 aa1.83□□□□□ -2.12
CCDC93-209ENST00000488908 RADILQ96JH8 1075 aa1.83□□□□□ -2.12
CCDC93-209ENST00000488908 AGXT2Q9BYV1 514 aa1.83□□□□□ -2.12
CCDC93-209ENST00000488908 MTMR12Q9C0I1 747 aa1.83□□□□□ -2.12
CCDC93-209ENST00000488908 CLEC5AQ9NY25 188 aa1.83□□□□□ -2.12
CCDC93-209ENST00000488908 WBP11Q9Y2W2 641 aaKnown RBP1.83□□□□□ -2.12
CCDC93-209ENST00000488908 ZNF541Q9H0D2 1346 aa1.83□□□□□ -2.12
CCDC93-209ENST00000488908 HEPACAM2A8MVW5 462 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 SNURFLB1AK76 121 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 PRDM1O75626 825 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 KRT33AO76009 404 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 AOC1P19801 751 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 RGS2P41220 211 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 UCNP55089 124 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 HNRNPKP61978 463 aaKnown RBP eCLIP1.82□□□□□ -2.12
CCDC93-209ENST00000488908 MED22Q15528 200 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 ASTE1Q2TB18 679 aaPredicted RBP1.82□□□□□ -2.12
CCDC93-209ENST00000488908 TTC31Q49AM3 519 aaPredicted RBP1.82□□□□□ -2.12
CCDC93-209ENST00000488908 SARM1Q6SZW1 724 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 TMPRSS11FQ6ZWK6 438 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 SERINC5Q86VE9 423 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 IQCHQ86VS3 1027 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 HSCBQ8IWL3 235 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 DIS3L2Q8IYB7 885 aaKnown RBP1.82□□□□□ -2.12
CCDC93-209ENST00000488908 TEX11Q8IYF3 940 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 CEP57L1Q8IYX8 460 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 OR52B6Q8NGF0 335 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 ZUFSPQ96AP4 578 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 RBM24Q9BX46 236 aaKnown RBP1.82□□□□□ -2.12
CCDC93-209ENST00000488908 TRPV4Q9HBA0 871 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 GKN1Q9NS71 199 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 NME7Q9Y5B8 376 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 SELENOKQ9Y6D0 94 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 PCDH11YQ9BZA8 1340 aa1.82□□□□□ -2.12
CCDC93-209ENST00000488908 RRN3P2A6NIE6 340 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 MED24O75448 989 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 HMGB1P09429 215 aaKnown RBP1.81□□□□□ -2.12
CCDC93-209ENST00000488908 FAM200BP0CF97 657 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 ANPEPP15144 967 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 PRELPP51888 382 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 CDK3Q00526 305 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 MYL7Q01449 175 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 ZNF415Q09FC8 603 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 LMOD3Q0VAK6 560 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 ITGA7Q13683 1181 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 TMEM132DQ14C87 1099 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 PTPN14Q15678 1187 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 POMGNT1Q8WZA1 660 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 NUS1Q96E22 293 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 C4orf45Q96LM5 186 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 C2orf48Q96LS8 159 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 APOL2Q9BQE5 337 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 PANK2Q9BZ23 570 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 WASH6PQ9NQA3 447 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.81□□□□□ -2.12
CCDC93-209ENST00000488908 BAIAP2L1Q9UHR4 511 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 POGZQ7Z3K3 1410 aa1.81□□□□□ -2.12
CCDC93-209ENST00000488908 IGHV3-38A0A0C4DH36 116 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 WI2-2373I1.2A0A1W2PRP0 233 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 ERAL1O75616 437 aaKnown RBP1.8□□□□□ -2.12
CCDC93-209ENST00000488908 TPPPO94811 219 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 RENP00797 406 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 PROS1P07225 676 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 PON1P27169 355 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 ELK3P41970 407 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 OR3A2P47893 321 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 CCT5P48643 541 aa1.8□□□□□ -2.12
CCDC93-209ENST00000488908 TUBP50607 506 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms