RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 ZSCAN1Q8NBB4 408 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 PPFIBP2Q8ND30 876 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 OR2A1Q8NGT9 310 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 ZNF480Q8WV37 535 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 DLG3Q92796 817 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 RBBP8Q99708 897 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 MIPEPQ99797 713 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 CPNE1Q99829 537 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 EFHD1Q9BUP0 239 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 ACAT2Q9BWD1 397 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 ACTR5Q9H9F9 607 aaPredicted RBP12.41□□□□□ -0.42
COL5A1-206ENST00000465877 LHX9Q9NQ69 397 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 TXNDC16Q9P2K2 825 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 TAC3Q9UHF0 121 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 VWA7Q9Y334 891 aa12.41□□□□□ -0.42
COL5A1-206ENST00000465877 H3BMH7 237 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 TERTO14746 1132 aaKnown RBP12.4□□□□□ -0.42
COL5A1-206ENST00000465877 NRP2O60462 931 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 OR2B3O76000 313 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 SAT1P21673 171 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 CMPK1P30085 196 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 RPA3P35244 121 aaPredicted RBP12.4□□□□□ -0.42
COL5A1-206ENST00000465877 TAS2R39P59534 338 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 IL2P60568 153 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 TBPL1P62380 186 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 ILF2Q12905 390 aaKnown RBP12.4□□□□□ -0.42
COL5A1-206ENST00000465877 NAA25Q14CX7 972 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 KBTBD12Q3ZCT8 623 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 FCRL6Q6DN72 434 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 FIGLAQ6QHK4 219 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 MBOAT1Q6ZNC8 495 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 C3orf62Q6ZUJ4 267 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 RNF44Q7L0R7 432 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 DSELQ8IZU8 1212 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 SLC38A9Q8NBW4 561 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 CT55Q8WUE5 264 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 SMPDL3AQ92484 453 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 STARD8Q92502 1023 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 CLIP3Q96DZ5 547 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 SLC45A3Q96JT2 553 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 LRFN5Q96NI6 719 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 UBL7Q96S82 380 aaPredicted RBP12.4□□□□□ -0.42
COL5A1-206ENST00000465877 FAM129AQ9BZQ8 928 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 LRRC4CQ9HCJ2 640 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 SLC6A20Q9NP91 592 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 PCMTD2Q9NV79 361 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 IRAK4Q9NWZ3 460 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 STOX2Q9P2F5 926 aaPredicted RBP12.4□□□□□ -0.42
COL5A1-206ENST00000465877 MTRF1LQ9UGC7 380 aaKnown RBP12.4□□□□□ -0.42
COL5A1-206ENST00000465877 IL17BQ9UHF5 180 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 PDE10AQ9Y233 779 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 KLK4Q9Y5K2 254 aa12.4□□□□□ -0.42
COL5A1-206ENST00000465877 MRPS18BQ9Y676 258 aaKnown RBP12.4□□□□□ -0.42
COL5A1-206ENST00000465877 ATRXP46100 2492 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 PIEZO2Q9H5I5 2752 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 CCDC88CQ9P219 2028 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 PABPN1LA6NDY0 278 aaKnown RBP12.39□□□□□ -0.43
COL5A1-206ENST00000465877 ZNF891A8MT65 544 aaPredicted RBP12.39□□□□□ -0.43
COL5A1-206ENST00000465877 E7ENX8 843 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 ERVH48-1M5A8F1 160 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 SLC16A5O15375 505 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 ZSCAN9O15535 394 aaPredicted RBP12.39□□□□□ -0.43
COL5A1-206ENST00000465877 ZNF749O43361 778 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 CCNDBP1O95273 360 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 CTSBP07858 339 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 CCNYL3P0C7X3 344 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 F8A1P23610 371 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 ECHS1P30084 290 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 RORAP35398 523 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 GP5P40197 560 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 GRIA3P42263 894 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 YBX1P67809 324 aaKnown RBP12.39□□□□□ -0.43
COL5A1-206ENST00000465877 CYP4F2P78329 520 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 RHDQ02161 417 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 TAP2Q03519 686 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 NAB1Q13506 487 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 DNASE1L3Q13609 305 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 EFTUD2Q15029 972 aaKnown RBP eCLIP12.39□□□□□ -0.43
COL5A1-206ENST00000465877 PHKG1Q16816 387 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 GLE1Q53GS7 698 aaKnown RBP12.39□□□□□ -0.43
COL5A1-206ENST00000465877 ICE2Q659A1 982 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 SBSNQ6UWP8 590 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 CYS1Q717R9 158 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 CEP97Q8IW35 865 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 CTAGE3PQ8IX95 158 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 LRRC56Q8IYG6 542 aaPredicted RBP12.39□□□□□ -0.43
COL5A1-206ENST00000465877 DNAJC22Q8N4W6 341 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 FBF1Q8TES7 1133 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 FMO2Q99518 471 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 GPR22Q99680 433 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 SLC12A9Q9BXP2 914 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 SLC7A5P2Q9GIP4 190 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 POPDC3Q9HBV1 291 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 MRPS30Q9NP92 439 aaKnown RBP12.39□□□□□ -0.43
COL5A1-206ENST00000465877 CCDC177Q9NQR7 707 aaPredicted RBP12.39□□□□□ -0.43
COL5A1-206ENST00000465877 ABCF3Q9NUQ8 709 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 EURLQ9NYK6 297 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 SERTAD3Q9UJW9 196 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 PADI1Q9ULC6 663 aa12.39□□□□□ -0.43
COL5A1-206ENST00000465877 PLCL2Q9UPR0 1127 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms