RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 MAD2L1Q13257 205 aaPredicted RBP11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 CTXN3Q4LDR2 81 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 FKBP9P1Q75LS8 142 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 TRIM46Q7Z4K8 759 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 RAVER1Q8IY67 606 aaKnown RBP11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 TMEM132CQ8N3T6 1108 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 POC5Q8NA72 575 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 TRPV1Q8NER1 839 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 ULK4Q96C45 1275 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 FUBP3Q96I24 572 aaKnown RBP eCLIP11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 FAM126AQ9BYI3 521 aaPredicted RBP11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 KCNH6Q9H252 994 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 PARVBQ9HBI1 364 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 KRT84Q9NSB2 600 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 THG1LQ9NWX6 298 aaKnown RBP11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 IL17CQ9P0M4 197 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 KIF17Q9P2E2 1029 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 ERVK-11Q9UQG0 969 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 HTTP42858 3142 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 LAMA3Q16787 3333 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 M0R082 166 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 GAPDHSO14556 408 aaPredicted RBP11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 ACSL4O60488 711 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 VNN2O95498 520 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 EPORP19235 508 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 GADD45AP24522 165 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 ZXDBP98169 803 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 NFE2Q16621 373 aaPredicted RBP11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 ATXN7L2Q5T6C5 722 aaPredicted RBP11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 ZCCHC8Q6NZY4 707 aaKnown RBP11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 RSPO2Q6UXX9 243 aaPredicted RBP11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 RNF19BQ6ZMZ0 732 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 LINC00299Q6ZSB3 139 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 PRSS48Q7RTY5 328 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 ENTHD1Q8IYW4 607 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 ATG16L2Q8NAA4 619 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 PDLIM5Q96HC4 596 aaKnown RBP11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 IL1RAPQ9NPH3 570 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 OLA1Q9NTK5 396 aaKnown RBP11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 ATP11BQ9Y2G3 1177 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 SAMHD1Q9Y3Z3 626 aaKnown RBP11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 FRMPD3Q5JV73 1810 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 A8MX80 341 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 SSX4O60224 188 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 ERN1O75460 977 aaKnown RBP11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 PRAMEF1O95521 474 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 RHOCP08134 193 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 PCYT1AP49585 367 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 CLK1P49759 484 aaKnown RBP11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 RPP38P78345 283 aaKnown RBP11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 IFITM2Q01629 132 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 CACNG1Q06432 222 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 ARHGEF7Q14155 803 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 LRIT3Q3SXY7 679 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 CLLU1OSQ5K130 101 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 GPR153Q6NV75 609 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 SPATC1Q76KD6 591 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 HORMAD1Q86X24 394 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 ELMO1Q92556 727 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 USP7Q93009 1102 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 SIGLEC11Q96RL6 698 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 APOL4Q9BPW4 351 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 EBPLQ9BY08 206 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 GPR63Q9BZJ6 419 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 CLPBQ9H078 707 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 TM9SF3Q9HD45 589 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 QPCTLQ9NXS2 382 aa11.42□□□□□ -0.58
PDZRN3-203ENST00000462146 METTL15A6NJ78 407 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 H7C0S8 307 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 WNT9AO14904 365 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 DSCR3O14972 297 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 FABP3P05413 133 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 SDC1P18827 310 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 SLC19A1P41440 591 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 CXCR4P61073 352 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 SEMG2Q02383 582 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 RING1Q06587 406 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 ABHD18Q0P651 414 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 ZXDCQ2QGD7 858 aaPredicted RBP11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 ZNF404Q494X3 552 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 KIAA1614Q5VZ46 1190 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 DESI1Q6ICB0 168 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 USP50Q70EL3 339 aaPredicted RBP11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 ADGRG2Q8IZP9 1017 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 SVOPQ8N4V2 548 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 WBP2Q969T9 261 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 APIPQ96GX9 242 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 HSH2DQ96JZ2 352 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 KCNC2Q96PR1 638 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 CTRCQ99895 268 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 ADGRE3Q9BY15 652 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 SAMD4AQ9UPU9 718 aaKnown RBP11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 FCF1Q9Y324 198 aaKnown RBP11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 PABPN1LA6NDY0 278 aaKnown RBP11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 RFXANKO14593 260 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 SNPHO15079 494 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 AIREO43918 545 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 CCNDBP1O95273 360 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 DNTTP04053 509 aa11.41□□□□□ -0.58
PDZRN3-203ENST00000462146 DNAJA1P31689 397 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms