RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 ALOXE3Q9BYJ1 711 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 CDCP1Q9H5V8 836 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 C12orf4Q9NQ89 552 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 NANSQ9NR45 359 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 FBXO9Q9UK97 447 aaPredicted RBP8.61□□□□□ -1.03
RTN4-206ENST00000394611 PTBP2Q9UKA9 531 aaKnown RBP8.61□□□□□ -1.03
RTN4-206ENST00000394611 PADI4Q9UM07 663 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 FADS2P1A8MWK0 482 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 CHURC1-FNTBB4DL54 471 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 LDB2O43679 373 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 PGRP06401 933 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 RRM2P31350 389 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 PTGS2P35354 604 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 SOX3P41225 446 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 CHMP1BQ7LBR1 199 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 PHF10Q8WUB8 498 aaKnown RBP8.61□□□□□ -1.03
RTN4-206ENST00000394611 PIK3R3Q92569 461 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 SNAPC3Q92966 411 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 EGLN2Q96KS0 407 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 SERPINB11Q96P15 392 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 TRIM54Q9BYV2 358 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 POLR1EQ9GZS1 481 aaKnown RBP8.61□□□□□ -1.03
RTN4-206ENST00000394611 MEAF6Q9HAF1 191 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 LRTM1Q9HBL6 345 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 A0A0G2JN53 185 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 FABP12A6NFH5 140 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 TBKBP1A7MCY6 615 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 CASKO14936 926 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 RGS14O43566 566 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 DYRK3O43781 588 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 CH25HO95992 272 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 AKR1A1P14550 325 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 PRKACBP22694 351 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 MLLT3P42568 568 aaPredicted RBP8.61□□□□□ -1.03
RTN4-206ENST00000394611 IFITM3Q01628 133 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 CXorf57Q6NSI4 855 aaKnown RBP8.61□□□□□ -1.03
RTN4-206ENST00000394611 BLOC1S3Q6QNY0 202 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 LARP4Q71RC2 724 aaKnown RBP eCLIP8.61□□□□□ -1.03
RTN4-206ENST00000394611 HOMEZQ8IX15 550 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 SMOQ99835 787 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 ADGRE3Q9BY15 652 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 RMND5AQ9H871 391 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 PRDM16Q9HAZ2 1276 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 PDLIM7Q9NR12 457 aa8.61□□□□□ -1.03
RTN4-206ENST00000394611 CEP290O15078 2479 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 MYADML2A6NDP7 307 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 FFAR2O15552 330 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 KIAA0513O60268 411 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 PTGER1P34995 402 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 THPOP40225 353 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 ATP12AP54707 1039 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 RAB14P61106 215 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 RPS24P62847 133 aaKnown RBP8.6□□□□□ -1.03
RTN4-206ENST00000394611 RPP38P78345 283 aaKnown RBP8.6□□□□□ -1.03
RTN4-206ENST00000394611 CLDN10P78369 228 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 CREMQ03060 361 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 ST3GAL4Q11206 333 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 CDK5R2Q13319 367 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 ACOX1Q15067 660 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 TYSND1Q2T9J0 566 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 GNASQ5JWF2 1037 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 ATXN7L2Q5T6C5 722 aaPredicted RBP8.6□□□□□ -1.03
RTN4-206ENST00000394611 LIPKQ5VXJ0 399 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 B3GLCTQ6Y288 498 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 GLCCI1Q86VQ1 547 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 METTL4Q8N3J2 472 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 HMGCLL1Q8TB92 370 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 TANKQ92844 425 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 RNFT2Q96EX2 444 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 MRGPRX2Q96LB1 330 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 CCM2Q9BSQ5 444 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 INPP5KQ9BT40 448 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 UCK2Q9BZX2 261 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 AMBRA1Q9C0C7 1298 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 SMOC2Q9H3U7 446 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 NMUR1Q9HB89 426 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 ASB1Q9Y576 335 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 TNFRSF11BO00300 401 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 ACOX3O15254 700 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 SLC25A14O95258 325 aaPredicted RBP8.6□□□□□ -1.03
RTN4-206ENST00000394611 C22orf31O95567 290 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 FABP3P05413 133 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 PEPDP12955 493 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 RHOAP61586 193 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 ERVK-8P63133 956 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 GTF2H2Q13888 395 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 PXDC1Q5TGL8 231 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 ZNF544Q6NX49 715 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 GTF2H2CQ6P1K8 395 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 MMAAQ8IVH4 418 aaKnown RBP8.6□□□□□ -1.03
RTN4-206ENST00000394611 TMEM199Q8N511 208 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 LSM14AQ8ND56 463 aaKnown RBP8.6□□□□□ -1.03
RTN4-206ENST00000394611 OR5H6Q8NGV6 325 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 LILRB4Q8NHJ6 448 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 TRIM63Q969Q1 353 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 NPY6RQ99463 290 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 EMILIN2Q9BXX0 1053 aa8.6□□□□□ -1.03
RTN4-206ENST00000394611 EIF2B3Q9NR50 452 aaKnown RBP8.6□□□□□ -1.03
RTN4-206ENST00000394611 POLR3BQ9NW08 1133 aaPredicted RBP8.6□□□□□ -1.03
RTN4-206ENST00000394611 THUMPD1Q9NXG2 353 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms