RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 PCBD2Q9H0N5 130 aa17.83■□□□□ 0.44
CHTOP-202ENST00000368687 LRRC4CQ9HCJ2 640 aa17.83■□□□□ 0.44
CHTOP-202ENST00000368687 SRPK3Q9UPE1 567 aa17.83■□□□□ 0.44
CHTOP-202ENST00000368687 SYF2O95926 243 aaKnown RBP17.82■□□□□ 0.44
CHTOP-202ENST00000368687 ZNF37AP17032 561 aaPredicted RBP17.82■□□□□ 0.44
CHTOP-202ENST00000368687 MAGP20916 626 aa17.82■□□□□ 0.44
CHTOP-202ENST00000368687 ABATP80404 500 aa17.82■□□□□ 0.44
CHTOP-202ENST00000368687 CRTC2Q53ET0 693 aaPredicted RBP17.82■□□□□ 0.44
CHTOP-202ENST00000368687 TAX1BP1Q86VP1 789 aa17.82■□□□□ 0.44
CHTOP-202ENST00000368687 GALNT6Q8NCL4 622 aa17.82■□□□□ 0.44
CHTOP-202ENST00000368687 OR2L3Q8NG85 312 aa17.82■□□□□ 0.44
CHTOP-202ENST00000368687 ATL1Q8WXF7 558 aa17.82■□□□□ 0.44
CHTOP-202ENST00000368687 SLC45A3Q96JT2 553 aa17.82■□□□□ 0.44
CHTOP-202ENST00000368687 BBC3Q96PG8 261 aaPredicted RBP17.82■□□□□ 0.44
CHTOP-202ENST00000368687 C17orf62Q9BQA9 187 aa17.82■□□□□ 0.44
CHTOP-202ENST00000368687 MCMBPQ9BTE3 642 aa17.82■□□□□ 0.44
CHTOP-202ENST00000368687 CPNE5Q9HCH3 593 aa17.82■□□□□ 0.44
CHTOP-202ENST00000368687 CIDEBQ9UHD4 219 aa17.82■□□□□ 0.44
CHTOP-202ENST00000368687 ZNF891A8MT65 544 aaPredicted RBP17.81■□□□□ 0.44
CHTOP-202ENST00000368687 EFSO43281 561 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 OR2B3O76000 313 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 ZNF28P17035 718 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 HRH2P25021 359 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 SPRP35270 261 aaPredicted RBP17.81■□□□□ 0.44
CHTOP-202ENST00000368687 GPX6P59796 221 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 TRADDQ15628 312 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 SOWAHCQ53LP3 525 aaPredicted RBP17.81■□□□□ 0.44
CHTOP-202ENST00000368687 TCTE1Q5JU00 501 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 GRTP1Q5TC63 336 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 ARHGAP40Q5TG30 622 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 FIGLAQ6QHK4 219 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 TIPARPQ7Z3E1 657 aaKnown RBP17.81■□□□□ 0.44
CHTOP-202ENST00000368687 VASH2Q86V25 355 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 CTAGE3PQ8IX95 158 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 IFT20Q8IY31 132 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 C2orf73Q8N5S3 287 aaPredicted RBP17.81■□□□□ 0.44
CHTOP-202ENST00000368687 OR2A1Q8NGT9 310 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 ZNF480Q8WV37 535 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 RBBP8Q99708 897 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 OLFM1Q99784 485 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 GPR87Q9BY21 358 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 KLHL25Q9H0H3 589 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 ACTR5Q9H9F9 607 aaPredicted RBP17.81■□□□□ 0.44
CHTOP-202ENST00000368687 LHX9Q9NQ69 397 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 ENAMQ9NRM1 1142 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 DMGDHQ9UI17 866 aaKnown RBP17.81■□□□□ 0.44
CHTOP-202ENST00000368687 NOVA2Q9UNW9 492 aaKnown RBP17.81■□□□□ 0.44
CHTOP-202ENST00000368687 PCDHGA4Q9Y5G9 962 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 SEC16AO15027 2179 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 SPTBP11277 2137 aa17.81■□□□□ 0.44
CHTOP-202ENST00000368687 ANKRD12Q6UB98 2062 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 A0A1W2PPV9 198 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 E7ENX8 843 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 ZSCAN9O15535 394 aaPredicted RBP17.8■□□□□ 0.44
CHTOP-202ENST00000368687 TIAF1O95411 115 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 TSPAN12O95859 305 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 RECKO95980 971 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 LIFP15018 202 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 GRIA3P42263 894 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 TAP2Q03519 686 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 RELAQ04206 551 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 ZIC1Q15915 447 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 KBTBD12Q3ZCT8 623 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 YOD1Q5VVQ6 348 aaPredicted RBP17.8■□□□□ 0.44
CHTOP-202ENST00000368687 CCDC91Q7Z6B0 441 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 DNAJC22Q8N4W6 341 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 LSM14AQ8ND56 463 aaKnown RBP17.8■□□□□ 0.44
CHTOP-202ENST00000368687 OR1L3Q8NH93 324 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 PROKR1Q8TCW9 393 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 IFT81Q8WYA0 676 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 DLG3Q92796 817 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 CLIP3Q96DZ5 547 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 UBL7Q96S82 380 aaPredicted RBP17.8■□□□□ 0.44
CHTOP-202ENST00000368687 GPR22Q99680 433 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 MIPEPQ99797 713 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 GPAMQ9HCL2 828 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 FAM60AQ9NP50 221 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 MRPS30Q9NP92 439 aaKnown RBP17.8■□□□□ 0.44
CHTOP-202ENST00000368687 CCDC177Q9NQR7 707 aaPredicted RBP17.8■□□□□ 0.44
CHTOP-202ENST00000368687 PDE10AQ9Y233 779 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 PCDHGA6Q9Y5G7 932 aa17.8■□□□□ 0.44
CHTOP-202ENST00000368687 HEATR5BQ9P2D3 2071 aa17.79■□□□□ 0.44
CHTOP-202ENST00000368687 SRPX2O60687 465 aaPredicted RBP17.79■□□□□ 0.44
CHTOP-202ENST00000368687 NTRK1P04629 796 aa17.79■□□□□ 0.44
CHTOP-202ENST00000368687 ITGB2P05107 769 aa17.79■□□□□ 0.44
CHTOP-202ENST00000368687 STMN1P16949 149 aa17.79■□□□□ 0.44
CHTOP-202ENST00000368687 SAT1P21673 171 aa17.79■□□□□ 0.44
CHTOP-202ENST00000368687 GABRA4P48169 554 aa17.79■□□□□ 0.44
CHTOP-202ENST00000368687 TAS2R39P59534 338 aa17.79■□□□□ 0.44
CHTOP-202ENST00000368687 PRDX1Q06830 199 aaKnown RBP17.79■□□□□ 0.44
CHTOP-202ENST00000368687 SLMAPQ14BN4 828 aa17.79■□□□□ 0.44
CHTOP-202ENST00000368687 THEMIS2Q5TEJ8 643 aa17.79■□□□□ 0.44
CHTOP-202ENST00000368687 KIAA1614Q5VZ46 1190 aa17.79■□□□□ 0.44
CHTOP-202ENST00000368687 ADAMTSL2Q86TH1 951 aa17.79■□□□□ 0.44
CHTOP-202ENST00000368687 CNPY4Q8N129 248 aa17.79■□□□□ 0.44
CHTOP-202ENST00000368687 FBF1Q8TES7 1133 aa17.79■□□□□ 0.44
CHTOP-202ENST00000368687 CATSPER2Q96P56 530 aa17.79■□□□□ 0.44
CHTOP-202ENST00000368687 CYTH2Q99418 400 aa17.79■□□□□ 0.44
CHTOP-202ENST00000368687 SMYD2Q9NRG4 433 aa17.79■□□□□ 0.44
CHTOP-202ENST00000368687 IRAK4Q9NWZ3 460 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms