RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 ZNF175Q9Y473 711 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 PCDHGC4Q9Y5F7 938 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 CITO14578 2027 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 A0A1W2PRG6 482 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 TCAF2A6NFQ2 919 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 C2orf74A8MZ97 194 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 H0Y858 1186 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 INSIG1O15503 277 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 OR4F21O95013 312 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 FUCA1P04066 466 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 CLTBP09497 229 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 PRKCQQ04759 706 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 CDKL4Q5MAI5 379 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 LDLRAP1Q5SW96 308 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 OGFOD2Q6N063 350 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 TMEM26Q6ZUK4 368 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 ANKS3Q6ZW76 656 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 ERMP1Q7Z2K6 904 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 UMODL1-AS1Q8N2C9 162 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 METTL25Q8N6Q8 603 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 PNPLA1Q8N8W4 532 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 ATG16L2Q8NAA4 619 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 TRPV3Q8NET8 790 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 TMEM169Q96HH4 297 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 FOPNLQ96NB1 174 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 OLFM1Q99784 485 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 PAAF1Q9BRP4 392 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 MCMBPQ9BTE3 642 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 MKRN2Q9H000 416 aaKnown RBP10.21□□□□□ -0.78
LIG1-220ENST00000601091 CD320Q9NPF0 282 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 ARL15Q9NXU5 204 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 SCML2Q9UQR0 700 aa10.21□□□□□ -0.78
LIG1-220ENST00000601091 CNTN5O94779 1100 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 CKMP06732 381 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 ANXA5P08758 320 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 PRIM2P49643 509 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 ATP4BP51164 291 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 ARSDP51689 593 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 TUBB3Q13509 450 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 SYTL3Q4VX76 610 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 GDF6Q6KF10 455 aaPredicted RBP10.2□□□□□ -0.78
LIG1-220ENST00000601091 ARSKQ6UWY0 536 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 CYP2U1Q7Z449 544 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 ERI1Q8IV48 349 aaKnown RBP10.2□□□□□ -0.78
LIG1-220ENST00000601091 SETD9Q8NE22 299 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 RORBQ92753 470 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 AARSD1Q9BTE6 412 aaKnown RBP10.2□□□□□ -0.78
LIG1-220ENST00000601091 CHID1Q9BWS9 393 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 DGCR6LQ9BY27 220 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 TM6SF2Q9BZW4 377 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 NARFLQ9H6Q4 476 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 GNPTGQ9UJJ9 305 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 OAZ3Q9UMX2 235 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 SLC28A1O00337 649 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 SLC9A3R1O14745 358 aaPredicted RBP10.2□□□□□ -0.78
LIG1-220ENST00000601091 EPOP01588 193 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 PGRP06401 933 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 NDUFV2P19404 249 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 HOXC12P31275 282 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 S100A12P80511 92 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 MS4A13Q5J8X5 152 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 RSBN1Q5VWQ0 802 aaPredicted RBP10.2□□□□□ -0.78
LIG1-220ENST00000601091 OFCC1Q8IZS5 231 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 PARP8Q8N3A8 854 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 DTD1Q8TEA8 209 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 SELENOMQ8WWX9 145 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 ZUFSPQ96AP4 578 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 TMEM209Q96SK2 561 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 ADAM19Q9H013 955 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 ZNF696Q9H7X3 374 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 ASH2LQ9UBL3 628 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 EI24O14681 340 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 ARPC2O15144 300 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 HOXC11O43248 304 aaPredicted RBP10.2□□□□□ -0.78
LIG1-220ENST00000601091 S1PR4O95977 384 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 PRKCGP05129 697 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 ZNF806P0C7X5 589 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 NR2C1P13056 603 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 CAPGP40121 348 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 CDKL1Q00532 357 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 TAF1AQ15573 450 aaPredicted RBP10.2□□□□□ -0.78
LIG1-220ENST00000601091 ZNF549Q6P9A3 640 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 CERS6Q6ZMG9 384 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 CHSY3Q70JA7 882 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 ANGPTL6Q8NI99 470 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 ISL2Q96A47 359 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 HBEGFQ99075 208 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 BCL2L14Q9BZR8 327 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 ZNF556Q9HAH1 456 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 TIGARQ9NQ88 270 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 TMEM248Q9NWD8 314 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 TOR4AQ9NXH8 423 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 NFKBIL1Q9UBC1 381 aaPredicted RBP10.2□□□□□ -0.78
LIG1-220ENST00000601091 ZNHIT2Q9UHR6 403 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 CNOT11Q9UKZ1 510 aaKnown RBP10.2□□□□□ -0.78
LIG1-220ENST00000601091 PNMA8BQ9ULN7 279 aaPredicted RBP10.2□□□□□ -0.78
LIG1-220ENST00000601091 TPRKBQ9Y3C4 175 aa10.2□□□□□ -0.78
LIG1-220ENST00000601091 POLR3HQ9Y535 204 aaPredicted RBP10.2□□□□□ -0.78
LIG1-220ENST00000601091 A0A1W2PP18 115 aa10.19□□□□□ -0.78
LIG1-220ENST00000601091 PRORSD1PA6NEY8 169 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms