RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 ZMAT2Q96NC0 199 aaKnown RBP3.6□□□□□ -1.83
CKS1BP3-201ENST00000600888 PLIN2Q99541 437 aa3.6□□□□□ -1.83
CKS1BP3-201ENST00000600888 TNMDQ9H2S6 317 aa3.6□□□□□ -1.83
CKS1BP3-201ENST00000600888 SLCO5A1Q9H2Y9 848 aa3.6□□□□□ -1.83
CKS1BP3-201ENST00000600888 CUEDC2Q9H467 287 aa3.6□□□□□ -1.83
CKS1BP3-201ENST00000600888 ASB7Q9H672 318 aa3.6□□□□□ -1.83
CKS1BP3-201ENST00000600888 C6orf106Q9H6K1 298 aaPredicted RBP3.6□□□□□ -1.83
CKS1BP3-201ENST00000600888 BRF2Q9HAW0 419 aa3.6□□□□□ -1.83
CKS1BP3-201ENST00000600888 MKKSQ9NPJ1 570 aaPredicted RBP3.6□□□□□ -1.83
CKS1BP3-201ENST00000600888 PCDHB16Q9NRJ7 776 aa3.6□□□□□ -1.83
CKS1BP3-201ENST00000600888 EPS15L1Q9UBC2 864 aa3.6□□□□□ -1.83
CKS1BP3-201ENST00000600888 CPSF3Q9UKF6 684 aaKnown RBP3.6□□□□□ -1.83
CKS1BP3-201ENST00000600888 UBQLN1Q9UMX0 589 aaKnown RBP3.6□□□□□ -1.83
CKS1BP3-201ENST00000600888 CDC14AQ9UNH5 594 aa3.6□□□□□ -1.83
CKS1BP3-201ENST00000600888 LRP12Q9Y561 859 aa3.6□□□□□ -1.83
CKS1BP3-201ENST00000600888 COL4A2P08572 1712 aa3.6□□□□□ -1.83
CKS1BP3-201ENST00000600888 CLUHO75153 1309 aa3.6□□□□□ -1.83
CKS1BP3-201ENST00000600888 WDFY4Q6ZS81 3184 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 SPAG17Q6Q759 2223 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 IGLV5-37A0A075B6J1 123 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 hDV102S1A0JD36 115 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 TMEM221A6NGB7 291 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 TTC36A6NLP5 189 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 LRRC53A6NM62 1247 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 KRTAP29-1A8MX34 341 aaPredicted RBP3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 USP17L23D6RBM5 183 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 ANHXE9PGG2 379 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 K7ENM7 598 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 M0R296 226 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 PIRO00625 290 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 N4BP1O75113 896 aaKnown RBP3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 TBCAO75347 108 aaKnown RBP3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 RFPL2O75678 378 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 GAGE7O76087 117 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 PPP1R3DO95685 299 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 GAGE12FP0CL80 117 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 GAGE12GP0CL81 117 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 GAGE12IP0CL82 117 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 IGHV4-30-4P0DP06 118 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 CXCL8P10145 99 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 LAMP2P13473 410 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 HOXB6P17509 224 aaKnown RBP3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 TYMPP19971 482 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 NMT1P30419 496 aaKnown RBP3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 SSTR2P30874 369 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 STX2P32856 288 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 OR1D2P34982 312 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 BRCC3P46736 316 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 LIG4P49917 911 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 PEX5P50542 639 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 EIF3BP55884 814 aaKnown RBP3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 OSTNP61366 133 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 SNRPFP62306 86 aaKnown RBP3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 GAGE1Q13065 139 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 GAGE4Q13068 117 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 MYBPHQ13203 477 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 TBX2Q13207 712 aaPredicted RBP3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 DHX34Q14147 1143 aaKnown RBP3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 STK38Q15208 465 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 C2orf68Q2NKX9 166 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 MMEL1Q495T6 779 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 GLRA4Q5JXX5 417 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 SPECC1Q5M775 1068 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 LIN9Q5TKA1 542 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 SPATA1Q5VX52 437 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 CAPRIN2Q6IMN6 1127 aaKnown RBP3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 CCDC70Q6NSX1 233 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 FAM173BQ6P4H8 233 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 LCTLQ6UWM7 567 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 PRSS57Q6UWY2 283 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 B3GNT6Q6ZMB0 384 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 MTSS1LQ765P7 747 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 C16orf82Q7Z2V1 217 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 SFR1Q86XK3 245 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 CEP57Q86XR8 500 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 HSCBQ8IWL3 235 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 ZBTB2Q8N680 514 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 IQUBQ8NA54 791 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 PCYOX1LQ8NBM8 494 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 APPL2Q8NEU8 664 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 HUS1BQ8NHY5 278 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 SPATA18Q8TC71 538 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 KCNG4Q8TDN1 519 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 RFFLQ8WZ73 363 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 RTP4Q96DX8 246 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 SCMH1Q96GD3 660 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 B3GALT6Q96L58 329 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 SLITRK1Q96PX8 696 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 TRIM9Q9C026 710 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 TKTL2Q9H0I9 626 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 RPF1Q9H9Y2 349 aaKnown RBP3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 MAGEF1Q9HAY2 307 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 TAS2R10Q9NYW0 307 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 CACNG4Q9UBN1 327 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 FBXO9Q9UK97 447 aaPredicted RBP3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 RCOR1Q9UKL0 485 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 CFAP45Q9UL16 551 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 DUSP12Q9UNI6 340 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 EXOC7Q9UPT5 735 aa3.59□□□□□ -1.83
CKS1BP3-201ENST00000600888 C2CD2Q9Y426 696 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms