RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 TRIM73Q86UV7 250 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 TAX1BP1Q86VP1 789 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 CTAGE3PQ8IX95 158 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 IFT20Q8IY31 132 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 NKAPQ8N5F7 415 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 LMNTD1Q8N9Z9 388 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 ZSCAN1Q8NBB4 408 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 FLVCR1-AS1Q8TAF5 88 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 DENND1AQ8TEH3 1009 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 ZUFSPQ96AP4 578 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 KIAA1143Q96AT1 154 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 ZNF501Q96CX3 271 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 TSPAN17Q96FV3 270 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 PDLIM5Q96HC4 596 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 HIST1H2AHQ96KK5 128 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 FMO2Q99518 471 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 PKP4Q99569 1192 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 HIST1H2AJQ99878 128 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 H2AFJQ9BTM1 129 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 SLC12A9Q9BXP2 914 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 KLHL25Q9H0H3 589 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 PARVBQ9HBI1 364 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 POPDC3Q9HBV1 291 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 ANKRD11Q6UB99 2663 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 USP24Q9UPU5 2620 aa16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 FREM2Q5SZK8 3169 aa16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 KIAA0754O94854 1291 aa16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 CCNDBP1O95273 360 aa16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 DLGAP3O95886 979 aa16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 ERGP11308 486 aa16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 PEBP1P30086 187 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 RPA3P35244 121 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 SPRP35270 261 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 PNLIPRP1P54315 467 aa16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 POU4F1Q01851 419 aa16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 ABHD18Q0P651 414 aa16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 GRTP1Q5TC63 336 aa16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 PWWP2BQ6NUJ5 590 aa16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 RELL1Q8IUW5 271 aa16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 TMEM126BQ8IUX1 230 aa16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 SYTL1Q8IYJ3 562 aa16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 GPR135Q8IZ08 494 aa16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 FBF1Q8TES7 1133 aa16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 CCDC138Q96M89 665 aa16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 OLFM1Q99784 485 aa16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 SMYD2Q9NRG4 433 aa16.66■□□□□ 0.26
SHKBP1-212ENST00000596163 TARM1B6A8C7 271 aa16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 TMEM150CB9EJG8 249 aa16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 PRICKLE3O43900 615 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 SCRG1O75711 98 aa16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 HBQ1P09105 142 aa16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 CMPK1P30085 196 aa16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 ITGA1P56199 1179 aa16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 TAS2R39P59534 338 aa16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 CXADRP78310 365 aa16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 VAC14Q08AM6 782 aa16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 ZC3H12BQ5HYM0 836 aaKnown RBP16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 CDHR3Q6ZTQ4 885 aa16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 PPM1NQ8N819 430 aa16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 ANKRD7Q92527 254 aa16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 RBBP8Q99708 897 aa16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 SLC7A5P2Q9GIP4 190 aa16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 UTP6Q9NYH9 597 aaKnown RBP16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 PADI1Q9ULC6 663 aa16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 LHX6Q9UPM6 363 aa16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 PLCL2Q9UPR0 1127 aa16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 PCDHB3Q9Y5E6 796 aa16.65■□□□□ 0.26
SHKBP1-212ENST00000596163 DMXL2Q8TDJ6 3036 aa16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 CXorf49A8MYA2 514 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 E7EQ34 232 aa16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 CPNE3O75131 537 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 SLC16A8O95907 504 aa16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 KLK3P07288 261 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 ENO2P09104 434 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 MAGP20916 626 aa16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 ABATP80404 500 aa16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 TSTA3Q13630 321 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 USP10Q14694 798 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 KBTBD12Q3ZCT8 623 aa16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 FIGLAQ6QHK4 219 aa16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 TIPARPQ7Z3E1 657 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 GPR155Q7Z3F1 870 aa16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 GALNT6Q8NCL4 622 aa16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 ZNF480Q8WV37 535 aa16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 CYTH2Q99418 400 aa16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 MIPEPQ99797 713 aa16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 MCMBPQ9BTE3 642 aa16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 PRORYQ9H606 182 aa16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 GPN2Q9H9Y4 310 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 GPAMQ9HCL2 828 aa16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 AP1M2Q9Y6Q5 423 aa16.64■□□□□ 0.25
SHKBP1-212ENST00000596163 E7ENX8 843 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 TSPAN12O95859 305 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 STMN1P16949 149 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 ZNF37AP17032 561 aaPredicted RBP16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 ZNF28P17035 718 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 AP1S2P56377 157 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 TAP2Q03519 686 aa16.63■□□□□ 0.25
SHKBP1-212ENST00000596163 FASTKQ14296 549 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms