RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 LRRC1Q9BTT6 524 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 SYTL2Q9HCH5 934 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 IRAK4Q9NWZ3 460 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 CROTQ9UKG9 612 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 CORO1CQ9ULV4 474 aaPredicted RBP11.4□□□□□ -0.58
RAB5C-204ENST00000547517 EIF3FO00303 357 aaPredicted RBP11.39□□□□□ -0.59
RAB5C-204ENST00000547517 PIAS1O75925 651 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 MT-ND3P03897 115 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 MSL3P1P0C860 447 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 SAT1P21673 171 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 OAS2P29728 719 aaKnown RBP11.39□□□□□ -0.59
RAB5C-204ENST00000547517 DLSTP36957 453 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 RGS4P49798 205 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 PGGT1BP53609 377 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 ITGA1P56199 1179 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 CYP4F2P78329 520 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 CYP2A13Q16696 494 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 LRRC8EQ6NSJ5 796 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 FAM45BPQ6NSW5 357 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 PAQR3Q6TCH7 311 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 UBE2R2Q712K3 238 aaPredicted RBP11.39□□□□□ -0.59
RAB5C-204ENST00000547517 STRA8Q7Z7C7 330 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 MYO1HQ8N1T3 1032 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 MNS1Q8NEH6 495 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 HMGCLL1Q8TB92 370 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 FAM45AQ8TCE6 357 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 CT55Q8WUE5 264 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 ASB11Q8WXH4 323 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 STARD8Q92502 1023 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 UBL7Q96S82 380 aaPredicted RBP11.39□□□□□ -0.59
RAB5C-204ENST00000547517 OLFM1Q99784 485 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 MIPEPQ99797 713 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 SLC7A5P2Q9GIP4 190 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 LHX9Q9NQ69 397 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 INTS7Q9NVH2 962 aaKnown RBP11.39□□□□□ -0.59
RAB5C-204ENST00000547517 MOCS1Q9NZB8 636 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 IL17BQ9UHF5 180 aa11.39□□□□□ -0.59
RAB5C-204ENST00000547517 MRPS18BQ9Y676 258 aaKnown RBP11.39□□□□□ -0.59
RAB5C-204ENST00000547517 SETXQ7Z333 2677 aaKnown RBP11.39□□□□□ -0.59
RAB5C-204ENST00000547517 MGAQ8IWI9 3026 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 FAM95CA0A1B0GW59 222 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 A0A1W2PPV9 198 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 TCRBV9S1A1TA0A576 114 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 CTAGE15A4D2H0 777 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 E7EQ34 232 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 HCRTR1O43613 425 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 ZBTB14O43829 449 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 OR2B3O76000 313 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 SLC16A8O95907 504 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 TUBB4AP04350 444 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 CCNYL3P0C7X3 344 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 CTAGE8P0CG41 777 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 PRKAR1AP10644 381 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 ERGP11308 486 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 FDXRP22570 491 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 RPA3P35244 121 aaPredicted RBP11.38□□□□□ -0.59
RAB5C-204ENST00000547517 SKIV2L2P42285 1042 aaKnown RBP11.38□□□□□ -0.59
RAB5C-204ENST00000547517 GABRA4P48169 554 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 PNLIPRP1P54315 467 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 RHDQ02161 417 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 GUCY2DQ02846 1103 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 CBLBQ13191 982 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 GPS2Q13227 327 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 TAF1BQ53T94 588 aaPredicted RBP11.38□□□□□ -0.59
RAB5C-204ENST00000547517 SUSD1Q6UWL2 747 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 CYHR1Q6ZMK1 362 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 CTAGE6Q86UF2 777 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 SLC26A11Q86WA9 606 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 ZC3HC1Q86WB0 502 aaKnown RBP11.38□□□□□ -0.59
RAB5C-204ENST00000547517 CTAGE4Q8IX94 777 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 SYTL1Q8IYJ3 562 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 GPR135Q8IZ08 494 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 NOA1Q8NC60 698 aaKnown RBP11.38□□□□□ -0.59
RAB5C-204ENST00000547517 PPFIBP2Q8ND30 876 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 OR2L3Q8NG85 312 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 KIF18AQ8NI77 898 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 EEF1AKMT1Q8WVE0 214 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 CDKL2Q92772 493 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 MR1Q95460 341 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 CLIP3Q96DZ5 547 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 SLC45A3Q96JT2 553 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 EFHD1Q9BUP0 239 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 ACAT2Q9BWD1 397 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 PHACTR1Q9C0D0 580 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 ACTR5Q9H9F9 607 aaPredicted RBP11.38□□□□□ -0.59
RAB5C-204ENST00000547517 SMYD2Q9NRG4 433 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 ABCF3Q9NUQ8 709 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 NSMCE4AQ9NXX6 385 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 SERTAD3Q9UJW9 196 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 ADAMTS6Q9UKP5 1117 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 PADI1Q9ULC6 663 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 PCDHB3Q9Y5E6 796 aa11.38□□□□□ -0.59
RAB5C-204ENST00000547517 SNRNP200O75643 2136 aaKnown RBP11.38□□□□□ -0.59
RAB5C-204ENST00000547517 ZNF839A8K0R7 811 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 ZNF891A8MT65 544 aaPredicted RBP11.37□□□□□ -0.59
RAB5C-204ENST00000547517 CXorf49A8MYA2 514 aaPredicted RBP11.37□□□□□ -0.59
RAB5C-204ENST00000547517 GFYI3L273 518 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 ERVH48-1M5A8F1 160 aa11.37□□□□□ -0.59
RAB5C-204ENST00000547517 ZSCAN9O15535 394 aaPredicted RBP11.37□□□□□ -0.59
RAB5C-204ENST00000547517 ZNF749O43361 778 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms