RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 ZNF541Q9H0D2 1346 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 SPRR5A0A1B0GTR4 108 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 HYKKA2RU49 373 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 C2orf81A6NN90 581 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 G3V2L1 256 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 K7EQD1 137 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 PDHXO00330 501 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 TRAFD1O14545 582 aaPredicted RBP0.51□□□□□ -2.33
COPB1-212ENST00000534771 MAGEB4O15481 346 aaPredicted RBP0.51□□□□□ -2.33
COPB1-212ENST00000534771 OGG1O15527 345 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 HCRTR2O43614 444 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 PRC1O43663 620 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 PRDM1O75626 825 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 GJB3O75712 270 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 SEC14L2O76054 403 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 RENP00797 406 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 MT-ND1P03886 318 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 ACTN1P12814 892 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 NMBRP28336 390 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 PTGER4P35408 488 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 GRK6P43250 576 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 HCFC1P51610 2035 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 NDUFV3P56181 108 aaKnown RBP0.51□□□□□ -2.33
COPB1-212ENST00000534771 ERVK-16P61578 105 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 OLR1P78380 273 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 GALNT2Q10471 571 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 TMEM115Q12893 351 aaPredicted RBP0.51□□□□□ -2.33
COPB1-212ENST00000534771 TAF10Q12962 218 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 ODF4Q2M2E3 257 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 ZSCAN23Q3MJ62 389 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 MAP9Q49MG5 647 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 SLC35D3Q5M8T2 416 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 LINC00242Q5T6M2 205 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 C9orf66Q5T8R8 295 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 CCSAPQ6IQ19 270 aaPredicted RBP0.51□□□□□ -2.33
COPB1-212ENST00000534771 UGT3A1Q6NUS8 523 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 DHX57Q6P158 1386 aaKnown RBP0.51□□□□□ -2.33
COPB1-212ENST00000534771 INO80CQ6PI98 192 aaPredicted RBP0.51□□□□□ -2.33
COPB1-212ENST00000534771 PAMR1Q6UXH9 720 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 LEKR1Q6ZMV7 388 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 SERINC5Q86VE9 423 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 FAM114A1Q8IWE2 563 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 ENTHD1Q8IYW4 607 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 Q8N9L7 120 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 AVL9Q8NBF6 648 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 OR52B6Q8NGF0 335 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 OR5M8Q8NGP6 311 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 NFKBIDQ8NI38 313 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 SPPL2AQ8TCT8 520 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 RNF138Q8WVD3 245 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 ZDHHC19Q8WVZ1 309 aaPredicted RBP0.51□□□□□ -2.33
COPB1-212ENST00000534771 ZKSCAN4Q969J2 545 aaPredicted RBP0.51□□□□□ -2.33
COPB1-212ENST00000534771 FAM104AQ969W3 186 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 MOAP1Q96BY2 351 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 INTS12Q96CB8 462 aaKnown RBP0.51□□□□□ -2.33
COPB1-212ENST00000534771 HVCN1Q96D96 273 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 ERLEC1Q96DZ1 483 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 MAELQ96JY0 434 aaKnown RBP0.51□□□□□ -2.33
COPB1-212ENST00000534771 OR6C1Q96RD1 312 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 NR1H4Q96RI1 486 aaPredicted RBP0.51□□□□□ -2.33
COPB1-212ENST00000534771 DDOQ99489 341 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 RAD9AQ99638 391 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 LPAR4Q99677 370 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 HNRNPABQ99729 332 aaKnown RBP0.51□□□□□ -2.33
COPB1-212ENST00000534771 PIP5K1AQ99755 562 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 BTBD10Q9BSF8 475 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 HGH1Q9BTY7 390 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 CCDC28BQ9BUN5 200 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 SCPEP1Q9HB40 452 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 TRPV4Q9HBA0 871 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 SPHK1Q9NYA1 384 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 C19orf25Q9UFG5 118 aaPredicted RBP0.51□□□□□ -2.33
COPB1-212ENST00000534771 AMACRQ9UHK6 382 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 TBX20Q9UMR3 447 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 NAALADL1Q9UQQ1 740 aa0.51□□□□□ -2.33
COPB1-212ENST00000534771 GAKO14976 1311 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 KDM3AQ9Y4C1 1321 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 IGHV3-38A0A0C4DH36 116 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 IQCMA0A1B0GVH7 501 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 A0A1W2PQF6 199 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 RPL37AP8A6NKH3 93 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 ARHGEF33A8MVX0 844 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 SNURFLB1AK76 121 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 ERVV-1B6SEH8 477 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 TEX28O15482 410 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 TXNL1O43396 289 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 SSX4O60224 188 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 PLIN1O60240 522 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 NXPH4O95158 308 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 F9P00740 461 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 HSPA8P11142 646 aaKnown RBP0.5□□□□□ -2.33
COPB1-212ENST00000534771 UMPSP11172 480 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 UBL4AP11441 157 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 DARSP14868 501 aaKnown RBP0.5□□□□□ -2.33
COPB1-212ENST00000534771 CD1EP15812 388 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 TMEM11P17152 192 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 LMO2P25791 158 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 PTPN3P26045 913 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 ICAM3P32942 547 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 OR3A2P47893 321 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms