RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 TMEM202A6NGA9 273 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 C2CD4BA6NLJ0 364 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 MAP2K7O14733 419 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 ADAMDEC1O15204 470 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 CCL16O15467 120 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 SYNCRIPO60506 623 aaKnown RBP4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 PPFIA2O75334 1257 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 PROP1O75360 226 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 ATP5BP06576 529 aaKnown RBP4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 TUBBP07437 444 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 MMP9P14780 707 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 ANXA7P20073 488 aaKnown RBP4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 UBA1P22314 1058 aaKnown RBP4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 ACADLP28330 430 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 TCF7P36402 384 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 RFX5P48382 616 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 GPR143P51810 404 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 SIRPAP78324 504 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 SP4Q02446 784 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 ST3GAL1Q11201 340 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 SNAPC1Q16533 368 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 PNLIPRP3Q17RR3 467 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 DUOXA1Q1HG43 343 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 ESCO2Q56NI9 601 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 IGSF11Q5DX21 431 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 PPM1LQ5SGD2 360 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 CELF3Q5SZQ8 465 aaKnown RBP4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 LIN9Q5TKA1 542 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 GGNBP1Q5YKI7 109 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 SIGIRRQ6IA17 410 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 FBXO42Q6P3S6 717 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 RBPMS2Q6ZRY4 209 aaKnown RBP4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 DENND5BQ6ZUT9 1274 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 TRILQ7L0X0 811 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 GLRX5Q86SX6 157 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 TRIM74Q86UV6 250 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 TRIM73Q86UV7 250 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 RBFAQ8N0V3 343 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 TC2NQ8N9U0 490 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 CEP76Q8TAP6 659 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 SSC4DQ8WTU2 575 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 SDR42E1Q8WUS8 393 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 KCNE4Q8WWG9 221 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 LPGAT1Q92604 370 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 ELSPBP1Q96BH3 223 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 MSANTD3Q96H12 275 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 CCDC43Q96MW1 224 aaKnown RBP4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 FERMT1Q9BQL6 677 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 WDR83Q9BRX9 315 aaKnown RBP4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 PCGF1Q9BSM1 259 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 KRTAP4-7Q9BYR0 210 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 KRTAP3-1Q9BYR8 98 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 DNAI2Q9GZS0 605 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 DNAJB4Q9UDY4 337 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 PLAGL1Q9UM63 463 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 PA2G4Q9UQ80 394 aaKnown RBP4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 SQORQ9Y6N5 450 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 APCP25054 2843 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 COL6A5A8TX70 2615 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 CEP192Q8TEP8 1941 aa4.64□□□□□ -1.67
HMGB1P23-201ENST00000518743 COL4A2P08572 1712 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 TNRC6BQ9UPQ9 1833 aaKnown RBP4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 PCSK5Q92824 1860 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 DOCK5Q9H7D0 1870 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 MAGEB17A8MXT2 336 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 SPECC1L-ADORA2AF8WAN1 911 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 CCDC188H7C350 402 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 HSPB6O14558 160 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 SMAD9O15198 467 aaKnown RBP4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 PTMAP06454 111 aaKnown RBP4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 SERPINF2P08697 491 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 PSMC3P17980 439 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 EDN2P20800 178 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 MARK3P27448 753 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 PTGER3P43115 390 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 YPEL5P62699 121 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 DGCR2P98153 550 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 CAMK2DQ13557 499 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 KRT33BQ14525 404 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 CDONQ4KMG0 1287 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 CBWD6Q4V339 395 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 CCDC92Q53HC0 331 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 CBWD3Q5JTY5 395 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 ZNF362Q5T0B9 420 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 ARHGEF16Q5VV41 709 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 FCRLBQ6BAA4 426 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 HEPHL1Q6MZM0 1159 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 LRRC8EQ6NSJ5 796 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 RAPH1Q70E73 1250 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 CAMKMTQ7Z624 323 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 RABEPKQ7Z6M1 372 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 IQCHQ86VS3 1027 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 TMPRSS12Q86WS5 348 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 ERICH1Q86X53 443 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 CEP97Q8IW35 865 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 NUP93Q8N1F7 819 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 PARP16Q8N5Y8 322 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 LRRC57Q8N9N7 239 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 HJURPQ8NCD3 748 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 TSTD1Q8NFU3 115 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms