RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 STK40Q8N2I9 435 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 PAF1Q8N7H5 531 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 Q8N9G6 341 aaPredicted RBP17.32■□□□□ 0.36
NUP54-205ENST00000507257 GALNT6Q8NCL4 622 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 SIMC1Q8NDZ2 872 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 IGSF8Q969P0 613 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 HBEGFQ99075 208 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 COPS4Q9BT78 406 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 FBXL12Q9NXK8 326 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 ABCG2Q9UNQ0 655 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 N6AMT1Q9Y5N5 214 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 SRCAPQ6ZRS2 3230 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 GOLGA8CPA6NN73 597 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 HOXC11O43248 304 aaPredicted RBP17.31■□□□□ 0.36
NUP54-205ENST00000507257 GJB3O75712 270 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 PARNO95453 639 aaKnown RBP17.31■□□□□ 0.36
NUP54-205ENST00000507257 FABP3P05413 133 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 TRAPPC2P0DI81 140 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 TRAPPC2BP0DI82 140 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 LPOP22079 712 aaPredicted RBP17.31■□□□□ 0.36
NUP54-205ENST00000507257 GADD45AP24522 165 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 ARL1P40616 181 aaPredicted RBP17.31■□□□□ 0.36
NUP54-205ENST00000507257 HTR3AP46098 478 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 ITGA1P56199 1179 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 CLDN8P56748 225 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 ARPC4P59998 168 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 CCDC190Q86UF4 302 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 SPATA2LQ8IUW3 424 aaPredicted RBP17.31■□□□□ 0.36
NUP54-205ENST00000507257 ENTHD1Q8IYW4 607 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 SLC22A15Q8IZD6 547 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 CPA6Q8N4T0 437 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 RASSF5Q8WWW0 418 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 USP7Q93009 1102 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 NTMT1Q9BV86 223 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 CEP44Q9C0F1 390 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 PDP1Q9P0J1 537 aaPredicted RBP17.31■□□□□ 0.36
NUP54-205ENST00000507257 AASSQ9UDR5 926 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 KLK4Q9Y5K2 254 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 AP1M2Q9Y6Q5 423 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 ARL5CA6NH57 179 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 CASTOR2A6NHX0 329 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 E5RI56 91 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 ARVCFO00192 962 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 FFAR2O15552 330 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 CDK1P06493 297 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 CXCR2P25025 360 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 KRT6CP48668 564 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 RPP38P78345 283 aaKnown RBP17.31■□□□□ 0.36
NUP54-205ENST00000507257 OLR1P78380 273 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 IRF5Q13568 498 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 PSAPL1Q6NUJ1 521 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 ERICH5Q6P6B1 374 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 DNAJC14Q6Y2X3 702 aaPredicted RBP17.31■□□□□ 0.36
NUP54-205ENST00000507257 HORMAD1Q86X24 394 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 PIANPQ8IYJ0 282 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 C10orf111Q8N326 155 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 MDGA1Q8NFP4 955 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 UBTD2Q8WUN7 234 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 DNASE1L2Q92874 299 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 HHIPQ96QV1 700 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 P2RY12Q9H244 342 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 SLC6A13Q9NSD5 602 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 LYVE1Q9Y5Y7 322 aa17.31■□□□□ 0.36
NUP54-205ENST00000507257 TNFRSF10AO00220 468 aa17.3■□□□□ 0.36
NUP54-205ENST00000507257 GTF2E2P29084 291 aaKnown RBP17.3■□□□□ 0.36
NUP54-205ENST00000507257 DDOSTP39656 456 aa17.3■□□□□ 0.36
NUP54-205ENST00000507257 PSEN2P49810 448 aa17.3■□□□□ 0.36
NUP54-205ENST00000507257 AFF1P51825 1210 aaKnown RBP17.3■□□□□ 0.36
NUP54-205ENST00000507257 UGT2B15P54855 530 aa17.3■□□□□ 0.36
NUP54-205ENST00000507257 CREMQ03060 361 aa17.3■□□□□ 0.36
NUP54-205ENST00000507257 CHRNEQ04844 493 aa17.3■□□□□ 0.36
NUP54-205ENST00000507257 ABRQ12979 859 aa17.3■□□□□ 0.36
NUP54-205ENST00000507257 GTF2H3Q13889 308 aa17.3■□□□□ 0.36
NUP54-205ENST00000507257 CARTPTQ16568 116 aa17.3■□□□□ 0.36
NUP54-205ENST00000507257 SYT16Q17RD7 645 aa17.3■□□□□ 0.36
NUP54-205ENST00000507257 SUSD1Q6UWL2 747 aa17.3■□□□□ 0.36
NUP54-205ENST00000507257 KRTCAP2Q8N6L1 136 aa17.3■□□□□ 0.36
NUP54-205ENST00000507257 ASCC1Q8N9N2 400 aaKnown RBP17.3■□□□□ 0.36
NUP54-205ENST00000507257 TESCQ96BS2 214 aa17.3■□□□□ 0.36
NUP54-205ENST00000507257 PSKH2Q96QS6 385 aa17.3■□□□□ 0.36
NUP54-205ENST00000507257 PAAF1Q9BRP4 392 aa17.3■□□□□ 0.36
NUP54-205ENST00000507257 SLC29A3Q9BZD2 475 aa17.3■□□□□ 0.36
NUP54-205ENST00000507257 NUAK2Q9H093 628 aa17.3■□□□□ 0.36
NUP54-205ENST00000507257 RETREG1Q9H6L5 497 aa17.3■□□□□ 0.36
NUP54-205ENST00000507257 PCDHB1Q9Y5F3 818 aa17.3■□□□□ 0.36
NUP54-205ENST00000507257 PDZK1P1A8MUH7 402 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 CAPN5O15484 640 aaPredicted RBP17.29■□□□□ 0.36
NUP54-205ENST00000507257 ULK1O75385 1050 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 C9P02748 559 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 EBLN1P0CF75 366 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 DBTP11182 482 aaKnown RBP17.29■□□□□ 0.36
NUP54-205ENST00000507257 PRPS2P11908 318 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 ALOX12P18054 663 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 HOXC8P31273 242 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 MC4RP32245 332 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 S100A3P33764 101 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 ACVRL1P37023 503 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 PIK3CBP42338 1070 aa17.29■□□□□ 0.36
NUP54-205ENST00000507257 CDKN1CP49918 316 aaPredicted RBP17.29■□□□□ 0.36
NUP54-205ENST00000507257 CAMK2GQ13555 558 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms