RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 PLOD2O00469 737 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 SUPT20HL2P0C7V6 817 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 PLA2G2AP14555 144 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 MFAP3P55082 362 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 MTCP1P56278 107 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 KLC1Q07866 573 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 LGALS3BPQ08380 585 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 ILF2Q12905 390 aaKnown RBP5.05□□□□□ -1.6
SSR3-208ENST00000496050 TYSND1Q2T9J0 566 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 ITPRIPL2Q3MIP1 535 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 PHLDA2Q53GA4 152 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 CCNYL2Q5T2Q4 361 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 NOTUMQ6P988 496 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 FOXL2NBQ6ZUU3 175 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 OTOAQ7RTW8 1153 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 CDK20Q8IZL9 346 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 LGI2Q8N0V4 545 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 DNAJC22Q8N4W6 341 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 BMPERQ8N8U9 685 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 SPATA20Q8TB22 786 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 BSCL2Q96G97 398 aaPredicted RBP5.05□□□□□ -1.6
SSR3-208ENST00000496050 NSL1Q96IY1 281 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 ST6GAL2Q96JF0 529 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 FUT8Q9BYC5 575 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 SLC2A11Q9BYW1 496 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 MMADHCQ9H3L0 296 aaPredicted RBP5.05□□□□□ -1.6
SSR3-208ENST00000496050 MINDY3Q9H8M7 445 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 COQ3Q9NZJ6 369 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 SEPT10Q9P0V9 454 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 DAPK2Q9UIK4 370 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 WDR83OSQ9Y284 106 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 TMED3Q9Y3Q3 217 aa5.05□□□□□ -1.6
SSR3-208ENST00000496050 A0A1W2PN81 502 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 A0A1W2PPK0 400 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 A4D1N5 150 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 DUXAA6NLW8 204 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 SMTNL1A8MU46 457 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 ZNF263O14978 683 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 SNX3O60493 162 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 GSRP00390 522 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 CHRNA7P36544 502 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 GMPSP49915 693 aaPredicted RBP5.04□□□□□ -1.6
SSR3-208ENST00000496050 PTENP60484 403 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 PHKG1Q16816 387 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 LACTB2Q53H82 288 aaPredicted RBP5.04□□□□□ -1.6
SSR3-208ENST00000496050 CAPRIN2Q6IMN6 1127 aaKnown RBP5.04□□□□□ -1.6
SSR3-208ENST00000496050 CASC4Q6P4E1 433 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 SLC27A1Q6PCB7 646 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 GBP6Q6ZN66 633 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 TMEM182Q6ZP80 229 aaPredicted RBP5.04□□□□□ -1.6
SSR3-208ENST00000496050 C15orf39Q6ZRI6 1047 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 NFE4Q86UQ8 179 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 AMIGO1Q86WK6 493 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 FOXP4Q8IVH2 680 aaPredicted RBP5.04□□□□□ -1.6
SSR3-208ENST00000496050 TUSC5Q8IXB3 177 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 CCDC170Q8IYT3 715 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 RASGEF1AQ8N9B8 481 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 NOA1Q8NC60 698 aaKnown RBP5.04□□□□□ -1.6
SSR3-208ENST00000496050 FIBINQ8TAL6 211 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 GRHL3Q8TE85 626 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 GRK7Q8WTQ7 553 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 ST6GALNAC6Q969X2 333 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 PGM2Q96G03 612 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 FAM71F1Q96KD3 344 aaPredicted RBP5.04□□□□□ -1.6
SSR3-208ENST00000496050 CCDC43Q96MW1 224 aaKnown RBP5.04□□□□□ -1.6
SSR3-208ENST00000496050 URM1Q9BTM9 101 aaKnown RBP5.04□□□□□ -1.6
SSR3-208ENST00000496050 UTP14AQ9BVJ6 771 aaKnown RBP5.04□□□□□ -1.6
SSR3-208ENST00000496050 TMEM206Q9H813 350 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 CACNG4Q9UBN1 327 aa5.04□□□□□ -1.6
SSR3-208ENST00000496050 IGSF1Q8N6C5 1336 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 IGKV2D-30A0A075B6S6 120 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 CASTOR2A6NHX0 329 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 PRKNO60260 465 aaPredicted RBP5.03□□□□□ -1.6
SSR3-208ENST00000496050 FMO6PO60774 539 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 ATP6AP2O75787 350 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 C9P02748 559 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 NR3C1P04150 777 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 TGFB3P10600 412 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 ATP6V1B1P15313 513 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 AMD1P17707 334 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 CCKARP32238 428 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 GSDMDP57764 484 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 ZNF415Q09FC8 603 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 TAF13Q15543 124 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 PTGISQ16647 500 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 SMU1Q2TAY7 513 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 CTU2Q2VPK5 515 aaKnown RBP5.03□□□□□ -1.6
SSR3-208ENST00000496050 ZNF585BQ52M93 769 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 DCAF10Q5QP82 559 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 GDPD4Q6W3E5 623 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 C9orf139Q6ZV77 190 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 C10orf53Q8N6V4 93 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 ZNF713Q8N859 430 aaPredicted RBP5.03□□□□□ -1.6
SSR3-208ENST00000496050 PHLDA1Q8WV24 401 aaPredicted RBP5.03□□□□□ -1.6
SSR3-208ENST00000496050 TRMT61BQ9BVS5 477 aaKnown RBP5.03□□□□□ -1.6
SSR3-208ENST00000496050 A4GALTQ9NPC4 353 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 ABCB8Q9NUT2 735 aa5.03□□□□□ -1.6
SSR3-208ENST00000496050 YDJCA8MPS7 323 aa5.02□□□□□ -1.61
SSR3-208ENST00000496050 SLC33A1O00400 549 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms