RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 ZNF662Q6ZS27 426 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 PNLDC1Q8NA58 520 aaKnown RBP10.86□□□□□ -0.67
KNOP1-201ENST00000219837 TNFAIP8L1Q8WVP5 186 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 NSMCE3Q96MG7 304 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 SMG9Q9H0W8 520 aaKnown RBP10.86□□□□□ -0.67
KNOP1-201ENST00000219837 SDHAF3Q9NRP4 125 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 MALT1Q9UDY8 824 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 UTS2RQ9UKP6 389 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 A0A1W2PRB8 838 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 C5orf51A6NDU8 294 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 PRORSD1PA6NEY8 169 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 ESR1P03372 595 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 NDUFS1P28331 727 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 RPS14P62263 151 aaKnown RBP10.86□□□□□ -0.67
KNOP1-201ENST00000219837 CSTF1Q05048 431 aaKnown RBP10.86□□□□□ -0.67
KNOP1-201ENST00000219837 TIGD5Q53EQ6 642 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 ADGRD1Q6QNK2 874 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 LAPTM4BQ86VI4 370 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 OR13C4Q8NGS5 318 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 PNPLA2Q96AD5 504 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 INPP4AQ96PE3 977 aaPredicted RBP10.86□□□□□ -0.67
KNOP1-201ENST00000219837 ZDHHC3Q9NYG2 299 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 P2RX2Q9UBL9 471 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 ZNF221Q9UK13 617 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 RUVBL1Q9Y265 456 aaKnown RBP10.86□□□□□ -0.67
KNOP1-201ENST00000219837 FAM237AA0A1B0GTK4 181 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 TCRBV21S2A2A0A5A6 115 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 OR51F1A6NGY5 319 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 MMP20O60882 483 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 LCA5LO95447 670 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 RAB39AQ14964 217 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 ARL13AQ5H913 290 aaPredicted RBP10.86□□□□□ -0.67
KNOP1-201ENST00000219837 TXNDC8Q6A555 127 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 KIAA1161Q6NSJ0 714 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 ZNF782Q6ZMW2 699 aaPredicted RBP10.86□□□□□ -0.67
KNOP1-201ENST00000219837 LRRTM4Q86VH4 590 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 DBF4BQ8NFT6 615 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 OR4E2Q8NGC2 313 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 GFM1Q96RP9 751 aaKnown RBP10.86□□□□□ -0.67
KNOP1-201ENST00000219837 GPR88Q9GZN0 384 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 FBXL12Q9NXK8 326 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 CCDC59Q9P031 241 aaKnown RBP10.86□□□□□ -0.67
KNOP1-201ENST00000219837 TAC3Q9UHF0 121 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 VSTM5A8MXK1 200 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 PI15O43692 258 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 OR1I1O60431 355 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 COQ9O75208 318 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 MTX2O75431 263 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 SNX4O95219 450 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 PRDX6P30041 224 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 XIAPP98170 497 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 LBX2Q6XYB7 198 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 ZZZ3Q8IYH5 903 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 ORAI3Q9BRQ5 295 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 CNTN3Q9P232 1028 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 MEMO1Q9Y316 297 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 AK5Q9Y6K8 562 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 A0A1W2PPL8 197 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 HLA-DQB2P05538 268 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 ACSL1P33121 698 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 XKP51811 444 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 GHRHRQ02643 423 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 SLC10A7Q0GE19 358 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 KLF1Q13351 362 aaPredicted RBP10.86□□□□□ -0.67
KNOP1-201ENST00000219837 FAM174BQ3ZCQ3 159 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 CRTC2Q53ET0 693 aaPredicted RBP10.86□□□□□ -0.67
KNOP1-201ENST00000219837 PRPF38BQ5VTL8 546 aaKnown RBP10.86□□□□□ -0.67
KNOP1-201ENST00000219837 METTL21CQ5VZV1 264 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 RAB43Q86YS6 212 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 KLHL36Q8N4N3 616 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 YIPF7Q8N8F6 280 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 SIPA1Q96FS4 1042 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 ZSWIM3Q96MP5 696 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 CENPMQ9NSP4 180 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 PCDHGA11Q9Y5H2 935 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 PMF1-BGLAPU3KQ54 211 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 ATRNL1Q5VV63 1379 aa10.86□□□□□ -0.67
KNOP1-201ENST00000219837 FAM240BA0A1B0GVZ2 78 aa10.85□□□□□ -0.67
KNOP1-201ENST00000219837 FUT4P22083 530 aa10.85□□□□□ -0.67
KNOP1-201ENST00000219837 PRKCDQ05655 676 aa10.85□□□□□ -0.67
KNOP1-201ENST00000219837 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.85□□□□□ -0.672e-9■□□□□ 11.1
KNOP1-201ENST00000219837 KLHL22Q53GT1 634 aa10.85□□□□□ -0.67
KNOP1-201ENST00000219837 SAMD14Q8IZD0 417 aaPredicted RBP10.85□□□□□ -0.67
KNOP1-201ENST00000219837 OR52E4Q8NGH9 312 aa10.85□□□□□ -0.67
KNOP1-201ENST00000219837 ROPN1LQ96C74 230 aa10.85□□□□□ -0.67
KNOP1-201ENST00000219837 CCSER2Q9H7U1 834 aa10.85□□□□□ -0.67
KNOP1-201ENST00000219837 SMPD3Q9NY59 655 aaPredicted RBP10.85□□□□□ -0.67
KNOP1-201ENST00000219837 INSL6Q9Y581 213 aa10.85□□□□□ -0.67
KNOP1-201ENST00000219837 ZNF878C9JN71 531 aa10.85□□□□□ -0.67
KNOP1-201ENST00000219837 CA12O43570 354 aa10.85□□□□□ -0.67
KNOP1-201ENST00000219837 F7P08709 466 aaPredicted RBP10.85□□□□□ -0.67
KNOP1-201ENST00000219837 RPL10P27635 214 aaKnown RBP10.85□□□□□ -0.67
KNOP1-201ENST00000219837 CCINQ13939 588 aa10.85□□□□□ -0.67
KNOP1-201ENST00000219837 PITRM1Q5JRX3 1037 aa10.85□□□□□ -0.67
KNOP1-201ENST00000219837 GRASPQ7Z6J2 395 aaPredicted RBP10.85□□□□□ -0.67
KNOP1-201ENST00000219837 MPP5Q8N3R9 675 aa10.85□□□□□ -0.67
KNOP1-201ENST00000219837 ZNF366Q8N895 744 aa10.85□□□□□ -0.67
KNOP1-201ENST00000219837 C4orf32Q8N8J7 132 aa10.85□□□□□ -0.67
KNOP1-201ENST00000219837 TFAP2BQ92481 460 aa10.85□□□□□ -0.67
KNOP1-201ENST00000219837 HAPLN3Q96S86 360 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms