RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 A0A087WXM4 84 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 THRBP10828 461 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 GRPRP30550 384 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 RPP38P78345 283 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 TLE2Q04725 743 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 SLC29A4Q7RTT9 530 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 OXR1Q8N573 874 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 IL22RA1Q8N6P7 574 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 FBXO22Q8NEZ5 403 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 GPR21Q99679 349 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 MAN2C1Q9NTJ4 1040 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 CDC7O00311 574 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 NME6O75414 186 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 CST3P01034 146 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 ITGAVP06756 1048 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 MLLT6P55198 1093 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 NINJ1Q92982 152 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 FGFBP2Q9BYJ0 223 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 UBIAD1Q9Y5Z9 338 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 FXYD6-FXYD2A0A087WZ82 144 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 NPIPA5E9PKD4 350 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 VAMP1P23763 118 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 SSX2Q16385 188 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 ZFP69Q49AA0 526 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 PRPF38BQ5VTL8 546 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 RAB12Q6IQ22 244 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 SLC51AQ86UW1 340 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 HERC2P3Q9BVR0 1158 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 FXYD6Q9H0Q3 95 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 NPIPA1Q9UND3 350 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 TMEM98Q9Y2Y6 226 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 J3QLW9 94 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 PROM1O43490 865 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 SELPP16109 830 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 ZNF19P17023 458 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 SLC1A2P43004 574 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 FXYD6P3P58550 94 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 RNASEH2BQ5TBB1 312 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 CUZD1Q86UP6 607 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 NXPE1Q8N323 547 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 NLGN2Q8NFZ4 835 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 TMEM125Q96AQ2 219 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 POLMQ9NP87 494 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 CCNB1IP1Q9NPC3 277 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 NUAK1O60285 661 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 SMIM11AP58511 58 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 ST3GAL4Q11206 333 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 PLPPR4Q7Z2D5 763 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 SUCNR1Q9BXA5 334 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 NIFKQ9BYG3 293 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 CHRAC1Q9NRG0 131 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 C2CD2Q9Y426 696 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 CCNKO75909 580 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 JUNP05412 331 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 MRPL3P09001 348 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 MTHFD1P11586 935 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 GSTT1P30711 240 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 AFF1P51825 1210 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 LRRC32Q14392 662 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 TXNDC11Q6PKC3 985 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 UBE2Q1Q7Z7E8 422 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 TINAGL1Q9GZM7 467 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 FN3KQ9H479 309 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 GNG8Q9UK08 70 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 DHRS12A0PJE2 317 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 ILF3Q12906 894 aaKnown RBP eCLIP16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 NNATQ16517 81 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 GALNT10Q86SR1 603 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 GPATCH1Q9BRR8 931 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 PRDM8Q9NQV8 689 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 VWA7Q9Y334 891 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 ZNF536O15090 1300 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 UNC5CO95185 931 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 NOGQ13253 232 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 VASH1Q7L8A9 365 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 ADAMTSL2Q86TH1 951 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 CIB1Q99828 191 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 CORO1CQ9ULV4 474 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 NOMO3P69849 1222 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 OR4E2Q8NGC2 313 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 EBNA1BP2Q99848 306 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 A0A1W2PRU2 124 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 TCRBV9S1A1TA0A576 114 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 A8MV72 311 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 FABP3P05413 133 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 CDH15P55291 814 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 SCGB2A2Q13296 93 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 SLC25A52Q3SY17 297 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 FAM71AQ8IYT1 594 aa16.67■□□□□ 0.26
CACNA1A-253ENST00000637927 BCKDKO14874 412 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 INHBEP58166 350 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 UGT8Q16880 541 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 USP30Q70CQ3 517 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 OR5J2Q8NH18 312 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 PCDH18Q9HCL0 1135 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 ERVK-5Q9HDB9 667 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 CIB4A0PJX0 185 aa16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 RPP40O75818 363 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-253ENST00000637927 ADH7P40394 386 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms