RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 RBM20Q5T481 1227 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 FBXO38Q6PIJ6 1188 aa16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 CYHR1Q6ZMK1 362 aa16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 MCOLN3Q8TDD5 553 aa16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 PMEPA1Q969W9 287 aa16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 VPS39Q96JC1 886 aa16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 IL17FQ96PD4 163 aa16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 NRTNQ99748 197 aa16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 MENTQ9BUN1 341 aa16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 TWSG1Q9GZX9 223 aa16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 CHRNA10Q9GZZ6 450 aa16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 ZDHHC18Q9NUE0 388 aa16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 SPHK1Q9NYA1 384 aa16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 SLC17A6Q9P2U8 582 aa16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 RUVBL2Q9Y230 463 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 TMEM184BQ9Y519 407 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-212ENST00000596163 ARHGEF33A8MVX0 844 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 GFYI3L273 518 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 MYO1CO00159 1063 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 SLC16A5O15375 505 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 RAD1O60671 282 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 STK17BO94768 372 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 C8GP07360 202 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 MSL3P1P0C860 447 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 ST6GAL1P15907 406 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 CYP2A7P20853 494 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 OAS2P29728 719 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 STX2P32856 288 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 SLC12A2P55011 1212 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 CDKN2DP55273 166 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 TMPRSS3P57727 454 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 MAP7Q14244 749 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 KCNAB1Q14722 419 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 SF1Q15637 639 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 CYP2A13Q16696 494 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 MANEAQ5SRI9 462 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 C19orf48Q6RUI8 117 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 PAQR3Q6TCH7 311 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 ZC3HC1Q86WB0 502 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 CACNA2D3Q8IZS8 1091 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 NLGN4XQ8N0W4 816 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 ESX1Q8N693 406 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 IL22RA1Q8N6P7 574 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 C19orf47Q8N9M1 422 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 LINC01555Q8NAE3 123 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 NLGN4YQ8NFZ3 816 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 EEF1AKMT1Q8WVE0 214 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 IFT81Q8WYA0 676 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 N4BP2L2Q92802 583 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 ELMO2Q96JJ3 720 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 PPM1MQ96MI6 270 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 CCNL2Q96S94 520 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 CPNE1Q99829 537 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 ULBP3Q9BZM4 244 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 RHOJQ9H4E5 214 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 CIDEBQ9UHD4 219 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 DMGDHQ9UI17 866 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 SERTAD3Q9UJW9 196 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 PILRAQ9UKJ1 303 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 CACNA1BQ00975 2339 aa16.69■□□□□ 0.26
SHKBP1-212ENST00000596163 KMT2BQ9UMN6 2715 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 FAM95CA0A1B0GW59 222 aa16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 TCRBV9S1A1TA0A576 114 aa16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 PABPN1LA6NDY0 278 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 FAM159BA6NKW6 160 aa16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 KRT37O76014 449 aa16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 SYF2O95926 243 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 FDXRP22570 491 aa16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 PHBP35232 272 aa16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 TIAL1Q01085 375 aaKnown RBP eCLIP16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 SP140Q13342 867 aa16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 NAA25Q14CX7 972 aa16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 CCSMST1Q4G0I0 132 aa16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 C6orf15Q6UXA7 325 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 CCDC81Q6ZN84 652 aa16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 UBE2R2Q712K3 238 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 PIWIL4Q7Z3Z4 852 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 C2orf73Q8N5S3 287 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 SMPDL3AQ92484 453 aa16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 NKD1Q969G9 470 aa16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 LINGO1Q96FE5 620 aa16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 EFHD1Q9BUP0 239 aa16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 TRIM54Q9BYV2 358 aa16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 SPRY4Q9C004 299 aa16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 LRRC4CQ9HCJ2 640 aa16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 SSUH2Q9Y2M2 353 aa16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 PSAT1Q9Y617 370 aa16.68■□□□□ 0.26
SHKBP1-212ENST00000596163 ASPMQ8IZT6 3477 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 HIST1H2AGP0C0S8 130 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 CCNYL3P0C7X3 344 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 PVRP15151 417 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 HIST1H2ADP20671 130 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 SAT1P21673 171 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 GP5P40197 560 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 GPX6P59796 221 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 NAB1Q13506 487 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 TGIF1Q15583 401 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 GPR19Q15760 415 aa16.67■□□□□ 0.26
SHKBP1-212ENST00000596163 COL28A1Q2UY09 1125 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms