RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 MRFAP1Q9Y605 127 aa11.43□□□□□ -0.58
RAB5C-204ENST00000547517 NBEAQ8NFP9 2946 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 ARHGEF33A8MVX0 844 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 TMEM150CB9EJG8 249 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 EFSO43281 561 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 MAP3K7O43318 606 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 MATN4O95460 622 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 CATP04040 527 aaKnown RBP11.42□□□□□ -0.58
RAB5C-204ENST00000547517 MCM3P25205 808 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 MAP4P27816 1152 aaKnown RBP11.42□□□□□ -0.58
RAB5C-204ENST00000547517 GABRB3P28472 473 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 SLC7A5Q01650 507 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 MAP7Q14244 749 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 KIR2DS3Q14952 304 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 SLC5A12Q1EHB4 618 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 DEFB110Q30KQ9 67 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 C6orf15Q6UXA7 325 aaPredicted RBP11.42□□□□□ -0.58
RAB5C-204ENST00000547517 CDHR3Q6ZTQ4 885 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 KIAA0408Q6ZU52 694 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 PIWIL4Q7Z3Z4 852 aaKnown RBP11.42□□□□□ -0.58
RAB5C-204ENST00000547517 TMEM126BQ8IUX1 230 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 ESX1Q8N693 406 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 GPATCH11Q8N954 259 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 MAGEC3Q8TD91 643 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 INPP5DQ92835 1189 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 KIAA1143Q96AT1 154 aaPredicted RBP11.42□□□□□ -0.58
RAB5C-204ENST00000547517 ZNF501Q96CX3 271 aaPredicted RBP11.42□□□□□ -0.58
RAB5C-204ENST00000547517 SPRY4Q9C004 299 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 GPN2Q9H9Y4 310 aaPredicted RBP11.42□□□□□ -0.58
RAB5C-204ENST00000547517 IGSF5Q9NSI5 407 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 ZFATQ9P243 1243 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 DHRS7Q9Y394 339 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 PCDHGA4Q9Y5G9 962 aa11.42□□□□□ -0.58
RAB5C-204ENST00000547517 LOC101059948A0A1B0GTJ6 334 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 ESYT3A0FGR9 886 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 PSIP1O75475 530 aaKnown RBP11.41□□□□□ -0.58
RAB5C-204ENST00000547517 SCRG1O75711 98 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 SYF2O95926 243 aaKnown RBP11.41□□□□□ -0.58
RAB5C-204ENST00000547517 AHSGP02765 367 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 NTRK1P04629 796 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 ENO3P13929 434 aaPredicted RBP11.41□□□□□ -0.58
RAB5C-204ENST00000547517 MAGP20916 626 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 PSMB5P28074 263 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 STAT5AP42229 794 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 PLTPP55058 493 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 CDKN2DP55273 166 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 MGAT5Q09328 741 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 ABHD18Q0P651 414 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 FRG1Q14331 258 aaKnown RBP11.41□□□□□ -0.58
RAB5C-204ENST00000547517 ZIC1Q15915 447 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 KIAA1614Q5VZ46 1190 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 UGT3A1Q6NUS8 523 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 NEK10Q6ZWH5 1172 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 GALNT7Q86SF2 657 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 BPHLQ86WA6 291 aaPredicted RBP11.41□□□□□ -0.58
RAB5C-204ENST00000547517 CCDC25Q86WR0 208 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 ZSCAN1Q8NBB4 408 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 OR1L3Q8NH93 324 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 DENND1AQ8TEH3 1009 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 PYROXD1Q8WU10 500 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 N4BP2L2Q92802 583 aaPredicted RBP11.41□□□□□ -0.58
RAB5C-204ENST00000547517 SLC22A18Q96BI1 424 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 TWSG1Q9GZX9 223 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 FAM60AQ9NP50 221 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 FAM114A2Q9NRY5 505 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 TAS2R13Q9NYV9 303 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 SPATA7Q9P0W8 599 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.41□□□□□ -0.58
RAB5C-204ENST00000547517 KLHL42Q9P2K6 505 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 KLHL20Q9Y2M5 609 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 PSAT1Q9Y617 370 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 ZFYVE26Q68DK2 2539 aa11.41□□□□□ -0.58
RAB5C-204ENST00000547517 KIF2AO00139 706 aaPredicted RBP11.4□□□□□ -0.58
RAB5C-204ENST00000547517 MYO1CO00159 1063 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 EIF3HO15372 352 aaKnown RBP eCLIP11.4□□□□□ -0.58
RAB5C-204ENST00000547517 CPNE3O75131 537 aaKnown RBP11.4□□□□□ -0.58
RAB5C-204ENST00000547517 MPC1LP0DKB6 136 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 CBSLP0DN79 551 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 CYP2A7P20853 494 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 SSTR1P30872 391 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 CBSP35520 551 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 TIAL1Q01085 375 aaKnown RBP eCLIP11.4□□□□□ -0.58
RAB5C-204ENST00000547517 CAV1Q03135 178 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 PDAP1Q13442 181 aaKnown RBP11.4□□□□□ -0.58
RAB5C-204ENST00000547517 TSTA3Q13630 321 aaPredicted RBP11.4□□□□□ -0.58
RAB5C-204ENST00000547517 FASTKQ14296 549 aaKnown RBP11.4□□□□□ -0.58
RAB5C-204ENST00000547517 TRADDQ15628 312 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 SF1Q15637 639 aaKnown RBP11.4□□□□□ -0.58
RAB5C-204ENST00000547517 HECTD2Q5U5R9 776 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 PRAMEF17Q5VTA0 474 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 ZDHHC24Q6UX98 284 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 PALM2Q8IXS6 379 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 OR9A1PQ8NGU1 263 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 OR8K5Q8NH50 307 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 FBXO25Q8TCJ0 367 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 SNRNP27Q8WVK2 155 aaKnown RBP11.4□□□□□ -0.58
RAB5C-204ENST00000547517 LINGO1Q96FE5 620 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 TCTN2Q96GX1 697 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 FCRL4Q96PJ5 515 aa11.4□□□□□ -0.58
RAB5C-204ENST00000547517 PKP4Q99569 1192 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms