RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 ZNF235Q14590 738 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 MS4A13Q5J8X5 152 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 ALG1LQ6GMV1 187 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 AHSA2Q719I0 299 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 CEP68Q76N32 757 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 PHACTR4Q8IZ21 702 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 OR52E6Q96RD3 313 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 KCNH6Q9H252 994 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 MAN2B2Q9Y2E5 1009 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 EVPLLA8MZ36 301 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 WBP4O75554 376 aaKnown RBP17.19■□□□□ 0.34
RAB40C-205ENST00000539661 PGLSO95336 258 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 CNPP09543 421 aaKnown RBP17.19■□□□□ 0.34
RAB40C-205ENST00000539661 GGT5P36269 586 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 PGFP49763 221 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 ARPC4P59998 168 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 TAF1AQ15573 450 aaPredicted RBP17.19■□□□□ 0.34
RAB40C-205ENST00000539661 DNAJC14Q6Y2X3 702 aaPredicted RBP17.19■□□□□ 0.34
RAB40C-205ENST00000539661 MILR1Q7Z6M3 343 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 HBEGFQ99075 208 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 BARD1Q99728 777 aaKnown RBP17.19■□□□□ 0.34
RAB40C-205ENST00000539661 CDADC1Q9BWV3 514 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 LOC110117498-PIK3R3F6TDL0 507 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 DSCR3O14972 297 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 RAMP2O60895 175 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 NIPSNAP2O75323 286 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 RPLP0P05388 317 aaKnown RBP17.19■□□□□ 0.34
RAB40C-205ENST00000539661 ALOX12P18054 663 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 GTF2E2P29084 291 aaKnown RBP17.19■□□□□ 0.34
RAB40C-205ENST00000539661 DMPKQ09013 629 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 PRAMEF19Q5SWL8 479 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 TMEM132CQ8N3T6 1108 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 OR4K2Q8NGD2 314 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 PIK3R3Q92569 461 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 NMUR1Q9HB89 426 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 KRT84Q9NSB2 600 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 PLCXD1Q9NUJ7 323 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 PCDHGB6Q9Y5F9 930 aa17.19■□□□□ 0.34
RAB40C-205ENST00000539661 M0R082 166 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 ZW10O43264 779 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 WDR47O94967 919 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 YBEYP58557 167 aaPredicted RBP17.18■□□□□ 0.34
RAB40C-205ENST00000539661 GTF2H3Q13889 308 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 DDR2Q16832 855 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 FBXO43Q4G163 708 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 CTSL3PQ5NE16 218 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 MLIPQ5VWP3 458 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 SLC46A3Q7Z3Q1 461 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 ADAMTSL2Q86TH1 951 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 SYTL1Q8IYJ3 562 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 SLC22A15Q8IZD6 547 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 PGBD3Q8N328 593 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 LIX1Q8N485 282 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 OR6F1Q8NGZ6 308 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 N6AMT1Q9Y5N5 214 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 HOXC11O43248 304 aaPredicted RBP17.18■□□□□ 0.34
RAB40C-205ENST00000539661 NDUFB5O43674 189 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 PRAMEF11O60813 436 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 GJB3O75712 270 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 DBTP11182 482 aaKnown RBP17.18■□□□□ 0.34
RAB40C-205ENST00000539661 GADD45AP24522 165 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 CXCR2P25025 360 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 GNPDA1P46926 289 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 TBX4P57082 545 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 SYT16Q17RD7 645 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 TTLL9Q3SXZ7 439 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 GTDC1Q4AE62 458 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 TTC23LQ6PF05 361 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 MYDGFQ969H8 173 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 COPS4Q9BT78 406 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 IPPKQ9H8X2 491 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 ABCG2Q9UNQ0 655 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 GRIP1Q9Y3R0 1128 aa17.18■□□□□ 0.34
RAB40C-205ENST00000539661 A0A1W2PQH9 124 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 C2orf81A6NN90 581 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 PDZK1P1A8MUH7 402 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 ARVCFO00192 962 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 KMOO15229 486 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 MAGEA11P43364 429 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 UPP1Q16831 310 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 TIGD6Q17RP2 521 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 RNF19BQ6ZMZ0 732 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 GLT6D1Q7Z4J2 308 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 CCDC32Q9BV29 185 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 PDP1Q9P0J1 537 aaPredicted RBP17.17■□□□□ 0.34
RAB40C-205ENST00000539661 KIF17Q9P2E2 1029 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 MICAL3Q7RTP6 2002 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 NLRC5Q86WI3 1866 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 MEIS3P2A8K0S8 358 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 TNFRSF10AO00220 468 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 KRT6CP48668 564 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 FAHD1Q6P587 224 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 TRIM46Q7Z4K8 759 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 LRRTM3Q86VH5 581 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 CCDC71Q8IV32 467 aaPredicted RBP17.17■□□□□ 0.34
RAB40C-205ENST00000539661 ASCC1Q8N9N2 400 aaKnown RBP17.17■□□□□ 0.34
RAB40C-205ENST00000539661 APH1BQ8WW43 257 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 SPO11Q9Y5K1 396 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 DRGXA6NNA5 263 aa17.17■□□□□ 0.34
RAB40C-205ENST00000539661 MYO1GB0I1T2 1018 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms