RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 ZNF146Q15072 292 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 SHHQ15465 462 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 TAB1Q15750 504 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 BAK1Q16611 211 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 CELF3Q5SZQ8 465 aaKnown RBP0.53□□□□□ -2.32
COPB1-212ENST00000534771 FAM69AQ5T7M9 428 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 GRTP1Q5TC63 336 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 MARC1Q5VT66 337 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 ANO1Q5XXA6 986 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 ZER1Q7Z7L7 766 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 COMMD2Q86X83 199 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 CATSPER3Q86XQ3 398 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 HSCBQ8IWL3 235 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 ANKRD13AQ8IZ07 590 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 CDK20Q8IZL9 346 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 C17orf53Q8N3J3 647 aaPredicted RBP0.53□□□□□ -2.32
COPB1-212ENST00000534771 TSPYL6Q8N831 410 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 OR5T2Q8NGG2 359 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 OR13J1Q8NGT2 312 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 OR52N5Q8NH56 324 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 TRPC4APQ8TEL6 797 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 CCT6BQ92526 530 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 FAM149B1Q96BN6 582 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 MAP7D2Q96T17 732 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 APOL2Q9BQE5 337 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 NYXQ9GZU5 481 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 MIS12Q9H081 205 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 SHARPINQ9H0F6 387 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 THAP2Q9H0W7 228 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 MTHFD2LQ9H903 347 aaPredicted RBP0.53□□□□□ -2.32
COPB1-212ENST00000534771 PCDHB16Q9NRJ7 776 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 KRT84Q9NSB2 600 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 CLEC5AQ9NY25 188 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 MTUS1Q9ULD2 1270 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 CAMK2AQ9UQM7 478 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP0.53□□□□□ -2.326e-9■■■■■ 35.4
COPB1-212ENST00000534771 CAPN7Q9Y6W3 813 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 SEC23IPQ9Y6Y8 1000 aaKnown RBP0.53□□□□□ -2.32
COPB1-212ENST00000534771 KIR2DL5BA0A0G2JN68 375 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 KIR2DL5BA0A0G2JPC4 375 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 ENO4A6NNW6 628 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 NPIPB9F8W1W9 429 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 TO15178 435 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 TNFSF14O43557 240 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 RNASEH1O60930 286 aaKnown RBP0.52□□□□□ -2.33
COPB1-212ENST00000534771 DDHD2O94830 711 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 SUPT20HL2P0C7V6 817 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 PCP11498 1178 aaKnown RBP0.52□□□□□ -2.33
COPB1-212ENST00000534771 RPL35AP18077 110 aaKnown RBP0.52□□□□□ -2.33
COPB1-212ENST00000534771 ELK1P19419 428 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 AOC1P19801 751 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 CDH3P22223 829 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 GIFP27352 417 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 ACADLP28330 430 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 CHRNA3P32297 505 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 CSTF2P33240 577 aaKnown RBP eCLIP0.52□□□□□ -2.33
COPB1-212ENST00000534771 ELK3P41970 407 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 ATP4BP51164 291 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 GPR143P51810 404 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 ZNF133P52736 654 aaPredicted RBP0.52□□□□□ -2.33
COPB1-212ENST00000534771 RARSP54136 660 aaKnown RBP0.52□□□□□ -2.33
COPB1-212ENST00000534771 GALCP54803 685 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 SNRPEP62304 92 aaKnown RBP0.52□□□□□ -2.33
COPB1-212ENST00000534771 IRX4P78413 519 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 FKBP3Q00688 224 aaKnown RBP0.52□□□□□ -2.33
COPB1-212ENST00000534771 GCNT1Q02742 428 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 TLE4Q04727 773 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 PNRC1Q12796 327 aaPredicted RBP0.52□□□□□ -2.33
COPB1-212ENST00000534771 CSTF3Q12996 717 aaKnown RBP0.52□□□□□ -2.33
COPB1-212ENST00000534771 CDH18Q13634 790 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 ITGA7Q13683 1181 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 HERC3Q15034 1050 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 PTPN14Q15678 1187 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 ZNF74Q16587 644 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 PRICKLE4Q2TBC4 344 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 PHLDA2Q53GA4 152 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 GPR157Q5UAW9 335 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 C3P1Q6ZMU1 363 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 TMUB2Q71RG4 321 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 HIPK1Q86Z02 1210 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 CPOQ8IVL8 374 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 KIR2DL5AQ8N109 375 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 TRIML1Q8N9V2 468 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 TDRD5Q8NAT2 981 aaKnown RBP0.52□□□□□ -2.33
COPB1-212ENST00000534771 VPS37AQ8NEZ2 397 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 OR10G7Q8NGN6 311 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 U2AF1L4Q8WU68 220 aaKnown RBP0.52□□□□□ -2.33
COPB1-212ENST00000534771 HERVK_113Q902F9 699 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 CFAP57Q96MR6 1250 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 DACH2Q96NX9 599 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 KIFC3Q9BVG8 833 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 RBM24Q9BX46 236 aaKnown RBP0.52□□□□□ -2.33
COPB1-212ENST00000534771 C1QTNF1Q9BXJ1 281 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 GPR63Q9BZJ6 419 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 PNNQ9H307 717 aaKnown RBP0.52□□□□□ -2.33
COPB1-212ENST00000534771 RPS6KB2Q9UBS0 482 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 ZNF69Q9UC07 566 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 BAIAP2L1Q9UHR4 511 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 LNPEPQ9UIQ6 1025 aa0.52□□□□□ -2.33
COPB1-212ENST00000534771 LYVE1Q9Y5Y7 322 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms