RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 A0A1W2PQH9 124 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 C2orf81A6NN90 581 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 EVPLLA8MZ36 301 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 LOC110117498-PIK3R3F6TDL0 507 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 M0QZQ0 153 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 M0R082 166 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 DSCR3O14972 297 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 IDH3BO43837 385 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 CCNKO75909 580 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 ESR1P03372 595 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 SEPHS1P49903 392 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 COPZ1P61923 177 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 PLIN5Q00G26 463 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 MSANTD1Q6ZTZ1 278 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 MILR1Q7Z6M3 343 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 LRRTM3Q86VH5 581 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 MON1AQ86VX9 555 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 DCBLD1Q8N8Z6 715 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 FAM83FQ8NEG4 500 aaPredicted RBP17.34■□□□□ 0.37
NUP54-205ENST00000507257 OR4K2Q8NGD2 314 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 OR6F1Q8NGZ6 308 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 PIK3R3Q92569 461 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 CCDC97Q96F63 343 aaPredicted RBP17.34■□□□□ 0.37
NUP54-205ENST00000507257 MGME1Q9BQP7 344 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 ZNF408Q9H9D4 720 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 SERHLQ9NQF3 203 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 FKBP14Q9NWM8 211 aa17.34■□□□□ 0.37
NUP54-205ENST00000507257 PNMA8BQ9ULN7 279 aaPredicted RBP17.34■□□□□ 0.37
NUP54-205ENST00000507257 MRPL42Q9Y6G3 142 aaKnown RBP17.34■□□□□ 0.37
NUP54-205ENST00000507257 TRIP12Q14669 1992 aaPredicted RBP17.33■□□□□ 0.37
NUP54-205ENST00000507257 HAS3O00219 553 aa17.33■□□□□ 0.37
NUP54-205ENST00000507257 GLUD1P00367 558 aa17.33■□□□□ 0.37
NUP54-205ENST00000507257 RPLP0P05388 317 aaKnown RBP17.33■□□□□ 0.37
NUP54-205ENST00000507257 FPGSQ05932 587 aa17.33■□□□□ 0.37
NUP54-205ENST00000507257 MFSD10Q14728 455 aa17.33■□□□□ 0.37
NUP54-205ENST00000507257 SMN1Q16637 294 aaKnown RBP17.33■□□□□ 0.37
NUP54-205ENST00000507257 RSBN1Q5VWQ0 802 aaPredicted RBP17.33■□□□□ 0.37
NUP54-205ENST00000507257 VASH1Q7L8A9 365 aaPredicted RBP17.33■□□□□ 0.37
NUP54-205ENST00000507257 SERPINA11Q86U17 422 aa17.33■□□□□ 0.37
NUP54-205ENST00000507257 CCDC71Q8IV32 467 aaPredicted RBP17.33■□□□□ 0.37
NUP54-205ENST00000507257 CCDC103Q8IW40 242 aa17.33■□□□□ 0.37
NUP54-205ENST00000507257 PHACTR4Q8IZ21 702 aa17.33■□□□□ 0.37
NUP54-205ENST00000507257 GPRC5AQ8NFJ5 357 aa17.33■□□□□ 0.37
NUP54-205ENST00000507257 OR10T2Q8NGX3 314 aa17.33■□□□□ 0.37
NUP54-205ENST00000507257 APH1BQ8WW43 257 aa17.33■□□□□ 0.37
NUP54-205ENST00000507257 HRASLS5Q96KN8 279 aa17.33■□□□□ 0.37
NUP54-205ENST00000507257 BARD1Q99728 777 aaKnown RBP17.33■□□□□ 0.37
NUP54-205ENST00000507257 RHNO1Q9BSD3 238 aa17.33■□□□□ 0.37
NUP54-205ENST00000507257 GABARAPL3Q9BY60 117 aa17.33■□□□□ 0.37
NUP54-205ENST00000507257 PDGFDQ9GZP0 370 aaPredicted RBP17.33■□□□□ 0.37
NUP54-205ENST00000507257 IPPKQ9H8X2 491 aa17.33■□□□□ 0.37
NUP54-205ENST00000507257 FAM105AQ9NUU6 356 aa17.33■□□□□ 0.37
NUP54-205ENST00000507257 MIOSQ9NXC5 875 aa17.33■□□□□ 0.37
NUP54-205ENST00000507257 ZNF221Q9UK13 617 aa17.33■□□□□ 0.37
NUP54-205ENST00000507257 SCML2Q9UQR0 700 aa17.33■□□□□ 0.37
NUP54-205ENST00000507257 PCDHGA3Q9Y5H0 932 aa17.33■□□□□ 0.37
NUP54-205ENST00000507257 SPO11Q9Y5K1 396 aa17.33■□□□□ 0.37
NUP54-205ENST00000507257 MEIS3P2A8K0S8 358 aa17.33■□□□□ 0.36
NUP54-205ENST00000507257 S100BP04271 92 aaPredicted RBP17.33■□□□□ 0.36
NUP54-205ENST00000507257 CNPP09543 421 aaKnown RBP17.33■□□□□ 0.36
NUP54-205ENST00000507257 CYP4B1P13584 511 aa17.33■□□□□ 0.36
NUP54-205ENST00000507257 PTPN6P29350 595 aa17.33■□□□□ 0.36
NUP54-205ENST00000507257 TSPY1Q01534 308 aa17.33■□□□□ 0.36
NUP54-205ENST00000507257 DDR2Q16832 855 aa17.33■□□□□ 0.36
NUP54-205ENST00000507257 USP39Q53GS9 565 aaKnown RBP17.33■□□□□ 0.36
NUP54-205ENST00000507257 SBSNQ6UWP8 590 aa17.33■□□□□ 0.36
NUP54-205ENST00000507257 AHSA2Q719I0 299 aa17.33■□□□□ 0.36
NUP54-205ENST00000507257 TAS2R42Q7RTR8 314 aa17.33■□□□□ 0.36
NUP54-205ENST00000507257 LIX1Q8N485 282 aa17.33■□□□□ 0.36
NUP54-205ENST00000507257 SETD6Q8TBK2 473 aa17.33■□□□□ 0.36
NUP54-205ENST00000507257 MYDGFQ969H8 173 aa17.33■□□□□ 0.36
NUP54-205ENST00000507257 C6orf62Q9GZU0 229 aaPredicted RBP17.33■□□□□ 0.36
NUP54-205ENST00000507257 LRTM1Q9HBL6 345 aa17.33■□□□□ 0.36
NUP54-205ENST00000507257 KRT84Q9NSB2 600 aa17.33■□□□□ 0.36
NUP54-205ENST00000507257 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.33■□□□□ 0.36
NUP54-205ENST00000507257 TRPS1Q9UHF7 1281 aa17.33■□□□□ 0.36
NUP54-205ENST00000507257 PSORS1C1Q9UIG5 152 aa17.33■□□□□ 0.36
NUP54-205ENST00000507257 RPS6KA6Q9UK32 745 aa17.33■□□□□ 0.36
NUP54-205ENST00000507257 TRAPPC4Q9Y296 219 aa17.33■□□□□ 0.36
NUP54-205ENST00000507257 DHRS7Q9Y394 339 aa17.33■□□□□ 0.36
NUP54-205ENST00000507257 PCDHGB6Q9Y5F9 930 aa17.33■□□□□ 0.36
NUP54-205ENST00000507257 H7C0S8 307 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 KMOO15229 486 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 ZW10O43264 779 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 TREHO43280 583 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 PCDHGA12O60330 932 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 PGLSO95336 258 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 PIRTP0C851 137 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 TGFBR1P36897 503 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 PTGER3P43115 390 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 CLCN7P51798 805 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 NKX2-5P52952 324 aaPredicted RBP17.32■□□□□ 0.36
NUP54-205ENST00000507257 NPRL3Q12980 569 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 TIGD6Q17RP2 521 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 GTDC1Q4AE62 458 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 FBXL22Q6P050 247 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 TTC23LQ6PF05 361 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 GLT6D1Q7Z4J2 308 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 UBQLNLQ8IYU4 475 aa17.32■□□□□ 0.36
NUP54-205ENST00000507257 THEM5Q8N1Q8 247 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms