RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 ZNF655Q8N720 491 aaPredicted RBP10.23□□□□□ -0.77
NELFE-213ENST00000494956 OR8K5Q8NH50 307 aa10.23□□□□□ -0.77
NELFE-213ENST00000494956 C9orf43Q8TAL5 461 aaPredicted RBP10.23□□□□□ -0.77
NELFE-213ENST00000494956 DENND1AQ8TEH3 1009 aa10.23□□□□□ -0.77
NELFE-213ENST00000494956 N4BP2L2Q92802 583 aaPredicted RBP10.23□□□□□ -0.77
NELFE-213ENST00000494956 PANX3Q96QZ0 392 aa10.23□□□□□ -0.77
NELFE-213ENST00000494956 TSSK1BQ9BXA7 367 aa10.23□□□□□ -0.77
NELFE-213ENST00000494956 DDX47Q9H0S4 455 aaKnown RBP10.23□□□□□ -0.77
NELFE-213ENST00000494956 FBXO6Q9NRD1 293 aaPredicted RBP10.23□□□□□ -0.77
NELFE-213ENST00000494956 OR6C2Q9NZP2 312 aa10.23□□□□□ -0.77
NELFE-213ENST00000494956 SERTAD3Q9UJW9 196 aa10.23□□□□□ -0.77
NELFE-213ENST00000494956 TLK1Q9UKI8 766 aa10.23□□□□□ -0.77
NELFE-213ENST00000494956 SNX12Q9UMY4 172 aa10.23□□□□□ -0.77
NELFE-213ENST00000494956 POLHQ9Y253 713 aa10.23□□□□□ -0.77
NELFE-213ENST00000494956 MAN2B2Q9Y2E5 1009 aa10.23□□□□□ -0.77
NELFE-213ENST00000494956 ARGFXA6NJG6 315 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 AP3B1O00203 1094 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 CNOT3O75175 753 aaKnown RBP10.22□□□□□ -0.77
NELFE-213ENST00000494956 OR2B3O76000 313 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 S1PR4O95977 384 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 SFTPCP11686 197 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 CHRM3P20309 590 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 CD9P21926 228 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 MCM3P25205 808 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 PTGIRP43119 386 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 RAB28P51157 221 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 RPS15P62841 145 aaKnown RBP10.22□□□□□ -0.77
NELFE-213ENST00000494956 MPP1Q00013 466 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 CUL1Q13616 776 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 SLC5A12Q1EHB4 618 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 CRTC2Q53ET0 693 aaPredicted RBP10.22□□□□□ -0.77
NELFE-213ENST00000494956 ACSBG2Q5FVE4 666 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 FCRL6Q6DN72 434 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 ZNF470Q6ECI4 717 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 MRNIPQ6NTE8 343 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 NEPROQ6NW34 567 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 ZNF549Q6P9A3 640 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 SDCCAG8Q86SQ7 713 aaPredicted RBP10.22□□□□□ -0.77
NELFE-213ENST00000494956 CILP2Q8IUL8 1156 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 NAT8LQ8N9F0 302 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 OR2L8Q8NGY9 312 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 GIMAP7Q8NHV1 300 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 ACTRT1Q8TDG2 376 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 TCTN2Q96GX1 697 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 CAPZA3Q96KX2 299 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 SIGLEC10Q96LC7 697 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 PWWP2AQ96N64 755 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 SLC7A5P2Q9GIP4 190 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 IRAK4Q9NWZ3 460 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 SAMD15Q9P1V8 674 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 METRNQ9UJH8 293 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 SLC39A10Q9ULF5 831 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 PYCARDQ9ULZ3 195 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 MAD1L1Q9Y6D9 718 aa10.22□□□□□ -0.77
NELFE-213ENST00000494956 HELZ2Q9BYK8 2649 aaKnown RBP10.21□□□□□ -0.77
NELFE-213ENST00000494956 TLN1Q9Y490 2541 aaKnown RBP10.21□□□□□ -0.77
NELFE-213ENST00000494956 FAM237BA0A1B0GVD1 139 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 A0A1W2PPV9 198 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 SDR42E2A6NKP2 422 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 ARHGEF33A8MVX0 844 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 F8W8V4 182 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 RASGRF2O14827 1237 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 PRICKLE3O43900 615 aaPredicted RBP10.21□□□□□ -0.77
NELFE-213ENST00000494956 MSL3P1P0C860 447 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 PKMP14618 531 aaKnown RBP10.21□□□□□ -0.77
NELFE-213ENST00000494956 OGNP20774 298 aaKnown RBP10.21□□□□□ -0.77
NELFE-213ENST00000494956 SLC1A2P43004 574 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 MAGEA3P43357 314 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 CCL11P51671 97 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 PMS2P54278 862 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 SARNPP82979 210 aaKnown RBP10.21□□□□□ -0.77
NELFE-213ENST00000494956 GBX1Q14549 363 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 KIR2DS3Q14952 304 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 UGT8Q16880 541 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 KLHL38Q2WGJ6 581 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 MSS51Q4VC12 460 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.21□□□□□ -0.77
NELFE-213ENST00000494956 HP1BP3Q5SSJ5 553 aaPredicted RBP10.21□□□□□ -0.77
NELFE-213ENST00000494956 RNASEH2BQ5TBB1 312 aaKnown RBP10.21□□□□□ -0.77
NELFE-213ENST00000494956 MLIPQ5VWP3 458 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 IZUMO3Q5VZ72 239 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 FIGLAQ6QHK4 219 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 SUSD1Q6UWL2 747 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 UNC5DQ6UXZ4 953 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 ATG14Q6ZNE5 492 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 SYVN1Q86TM6 617 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 LRRC6Q86X45 466 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 GPR135Q8IZ08 494 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 MCUQ8NE86 351 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 ADAMTS17Q8TE56 1095 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.21□□□□□ -0.77
NELFE-213ENST00000494956 LRFN5Q96NI6 719 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 MIPEPQ99797 713 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 GPR87Q9BY21 358 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 NLNQ9BYT8 704 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 EPN3Q9H201 632 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 SYTL2Q9HCH5 934 aa10.21□□□□□ -0.77
NELFE-213ENST00000494956 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.21□□□□□ -0.77
NELFE-213ENST00000494956 STOX2Q9P2F5 926 aaPredicted RBP10.21□□□□□ -0.77
NELFE-213ENST00000494956 SLC17A6Q9P2U8 582 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms