RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 OR2A14Q96R47 310 aa17.9■□□□□ 0.46
CHTOP-202ENST00000368687 CTRCQ99895 268 aa17.9■□□□□ 0.46
CHTOP-202ENST00000368687 MENTQ9BUN1 341 aa17.9■□□□□ 0.46
CHTOP-202ENST00000368687 TXNDC16Q9P2K2 825 aa17.9■□□□□ 0.46
CHTOP-202ENST00000368687 MTRF1LQ9UGC7 380 aaKnown RBP17.9■□□□□ 0.46
CHTOP-202ENST00000368687 PILRAQ9UKJ1 303 aa17.9■□□□□ 0.46
CHTOP-202ENST00000368687 MED16Q9Y2X0 877 aa17.9■□□□□ 0.46
CHTOP-202ENST00000368687 IGSF10Q6WRI0 2623 aa17.89■□□□□ 0.46
CHTOP-202ENST00000368687 SLC9B1P1A6NJY1 282 aa17.89■□□□□ 0.45
CHTOP-202ENST00000368687 ISM1B1AKI9 464 aa17.89■□□□□ 0.45
CHTOP-202ENST00000368687 MYO1CO00159 1063 aa17.89■□□□□ 0.45
CHTOP-202ENST00000368687 ZBTB14O43829 449 aa17.89■□□□□ 0.45
CHTOP-202ENST00000368687 EBLN1P0CF75 366 aa17.89■□□□□ 0.45
CHTOP-202ENST00000368687 FOLR1P15328 257 aa17.89■□□□□ 0.45
CHTOP-202ENST00000368687 SP140Q13342 867 aa17.89■□□□□ 0.45
CHTOP-202ENST00000368687 CACNA2D3Q8IZS8 1091 aa17.89■□□□□ 0.45
CHTOP-202ENST00000368687 C19orf47Q8N9M1 422 aaKnown RBP17.89■□□□□ 0.45
CHTOP-202ENST00000368687 ZSCAN1Q8NBB4 408 aa17.89■□□□□ 0.45
CHTOP-202ENST00000368687 OR9A1PQ8NGU1 263 aa17.89■□□□□ 0.45
CHTOP-202ENST00000368687 GIMAP7Q8NHV1 300 aa17.89■□□□□ 0.45
CHTOP-202ENST00000368687 SNRNP27Q8WVK2 155 aaKnown RBP17.89■□□□□ 0.45
CHTOP-202ENST00000368687 ASB11Q8WXH4 323 aa17.89■□□□□ 0.45
CHTOP-202ENST00000368687 PMEPA1Q969W9 287 aa17.89■□□□□ 0.45
CHTOP-202ENST00000368687 KIAA1143Q96AT1 154 aaPredicted RBP17.89■□□□□ 0.45
CHTOP-202ENST00000368687 TRAPPC9Q96Q05 1148 aa17.89■□□□□ 0.45
CHTOP-202ENST00000368687 LRRC1Q9BTT6 524 aa17.89■□□□□ 0.45
CHTOP-202ENST00000368687 APMAPQ9HDC9 416 aa17.89■□□□□ 0.45
CHTOP-202ENST00000368687 PLAGL1Q9UM63 463 aa17.89■□□□□ 0.45
CHTOP-202ENST00000368687 NFS1Q9Y697 457 aa17.89■□□□□ 0.45
CHTOP-202ENST00000368687 RAD1O60671 282 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 DLGAP3O95886 979 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 C8GP07360 202 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 TPBGLP0DKB5 382 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 ST6GAL1P15907 406 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 GABRB3P28472 473 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 STX2P32856 288 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 BDKRB1P46663 353 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 VAC14Q08AM6 782 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 ABHD18Q0P651 414 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 PDAP1Q13442 181 aaKnown RBP17.88■□□□□ 0.45
CHTOP-202ENST00000368687 GRB7Q14451 532 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 CYP2A13Q16696 494 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 CCDC81Q6ZN84 652 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 MYO1HQ8N1T3 1032 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 GPATCH11Q8N954 259 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 N4BP2L2Q92802 583 aaPredicted RBP17.88■□□□□ 0.45
CHTOP-202ENST00000368687 NKD1Q969G9 470 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 VPS39Q96JC1 886 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 NDNQ99608 321 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 SPRY4Q9C004 299 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 GALPQ9UBC7 116 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 SERTAD3Q9UJW9 196 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 VWA7Q9Y334 891 aa17.88■□□□□ 0.45
CHTOP-202ENST00000368687 PABPN1LA6NDY0 278 aaKnown RBP17.87■□□□□ 0.45
CHTOP-202ENST00000368687 ARHGEF33A8MVX0 844 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 GFYI3L273 518 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 CCNYL3P0C7X3 344 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 ERGP11308 486 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 CYP2A7P20853 494 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 IL2P60568 153 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 SLC7A5Q01650 507 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 GUCY2DQ02846 1103 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 NAB1Q13506 487 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 CUL1Q13616 776 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 KCNAB1Q14722 419 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 C6orf15Q6UXA7 325 aaPredicted RBP17.87■□□□□ 0.45
CHTOP-202ENST00000368687 C3orf62Q6ZUJ4 267 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 GPR155Q7Z3F1 870 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 STRA8Q7Z7C7 330 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 CCDC25Q86WR0 208 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 CPNE9Q8IYJ1 553 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 LINC01555Q8NAE3 123 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 SLC30A3Q99726 388 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 FAM117AQ9C073 453 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 RHOJQ9H4E5 214 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 SPHK1Q9NYA1 384 aa17.87■□□□□ 0.45
CHTOP-202ENST00000368687 SNRNP200O75643 2136 aaKnown RBP17.87■□□□□ 0.45
CHTOP-202ENST00000368687 SMG1Q96Q15 3661 aaKnown RBP17.86■□□□□ 0.45
CHTOP-202ENST00000368687 PCM1Q15154 2024 aa17.86■□□□□ 0.45
CHTOP-202ENST00000368687 TEX51A0A1B0GUA7 166 aa17.86■□□□□ 0.45
CHTOP-202ENST00000368687 TCRBV9S1A1TA0A576 114 aa17.86■□□□□ 0.45
CHTOP-202ENST00000368687 K7ENP7 123 aa17.86■□□□□ 0.45
CHTOP-202ENST00000368687 SLC16A5O15375 505 aa17.86■□□□□ 0.45
CHTOP-202ENST00000368687 CPNE3O75131 537 aaKnown RBP17.86■□□□□ 0.45
CHTOP-202ENST00000368687 HBQ1P09105 142 aa17.86■□□□□ 0.45
CHTOP-202ENST00000368687 FDXRP22570 491 aa17.86■□□□□ 0.45
CHTOP-202ENST00000368687 MCM3P25205 808 aa17.86■□□□□ 0.45
CHTOP-202ENST00000368687 OAS2P29728 719 aaKnown RBP17.86■□□□□ 0.45
CHTOP-202ENST00000368687 MAGEA4P43358 317 aa17.86■□□□□ 0.45
CHTOP-202ENST00000368687 HECTD2Q5U5R9 776 aa17.86■□□□□ 0.45
CHTOP-202ENST00000368687 INO80CQ6PI98 192 aaPredicted RBP17.86■□□□□ 0.45
CHTOP-202ENST00000368687 ZDHHC24Q6UX98 284 aa17.86■□□□□ 0.45
CHTOP-202ENST00000368687 ZC3HC1Q86WB0 502 aaKnown RBP17.86■□□□□ 0.45
CHTOP-202ENST00000368687 TMEM126BQ8IUX1 230 aa17.86■□□□□ 0.45
CHTOP-202ENST00000368687 GPR135Q8IZ08 494 aa17.86■□□□□ 0.45
CHTOP-202ENST00000368687 FLVCR1-AS1Q8TAF5 88 aa17.86■□□□□ 0.45
CHTOP-202ENST00000368687 MCOLN3Q8TDD5 553 aa17.86■□□□□ 0.45
CHTOP-202ENST00000368687 SMPDL3AQ92484 453 aa17.86■□□□□ 0.45
CHTOP-202ENST00000368687 ZUFSPQ96AP4 578 aa17.86■□□□□ 0.45
CHTOP-202ENST00000368687 ZNF501Q96CX3 271 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms