RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 PAPD5Q8NDF8 572 aaKnown RBP8.92□□□□□ -0.98
TOP1-201ENST00000361337 OR10Q1Q8NGQ4 319 aa8.92□□□□□ -0.98
TOP1-201ENST00000361337 MCFD2Q8NI22 146 aa8.92□□□□□ -0.98
TOP1-201ENST00000361337 NDNFQ8TB73 568 aa8.92□□□□□ -0.98
TOP1-201ENST00000361337 RAB2BQ8WUD1 216 aa8.92□□□□□ -0.98
TOP1-201ENST00000361337 PROX1Q92786 737 aa8.92□□□□□ -0.98
TOP1-201ENST00000361337 TRIM63Q969Q1 353 aa8.92□□□□□ -0.98
TOP1-201ENST00000361337 RTP3Q9BQQ7 232 aa8.92□□□□□ -0.98
TOP1-201ENST00000361337 TMEM246Q9BRR3 403 aa8.92□□□□□ -0.98
TOP1-201ENST00000361337 RHNO1Q9BSD3 238 aa8.92□□□□□ -0.98
TOP1-201ENST00000361337 TDRD1Q9BXT4 1180 aaKnown RBP8.92□□□□□ -0.98
TOP1-201ENST00000361337 ASPSCR1Q9BZE9 553 aa8.92□□□□□ -0.98
TOP1-201ENST00000361337 NEK6Q9HC98 313 aa8.92□□□□□ -0.98
TOP1-201ENST00000361337 PRDM8Q9NQV8 689 aa8.92□□□□□ -0.98
TOP1-201ENST00000361337 KIF17Q9P2E2 1029 aa8.92□□□□□ -0.98
TOP1-201ENST00000361337 ARL5AQ9Y689 179 aa8.92□□□□□ -0.98
TOP1-201ENST00000361337 CNOT1A5YKK6 2376 aaKnown RBP8.91□□□□□ -0.98
TOP1-201ENST00000361337 GABRDO14764 452 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 STX7O15400 261 aaKnown RBP8.91□□□□□ -0.98
TOP1-201ENST00000361337 XPNPEP2O43895 674 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 LZTS3O60299 673 aaPredicted RBP8.91□□□□□ -0.98
TOP1-201ENST00000361337 GRK3P35626 688 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 GEMP55040 296 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 CD83Q01151 205 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 RCAN2Q14206 197 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 CTF1Q16619 201 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 DGUOKQ16854 277 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 ANGPTL8Q6UXH0 198 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 SLC43A3Q8NBI5 491 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 CHDHQ8NE62 594 aaPredicted RBP8.91□□□□□ -0.98
TOP1-201ENST00000361337 PGAP3Q96FM1 320 aaPredicted RBP8.91□□□□□ -0.98
TOP1-201ENST00000361337 MBOAT4Q96T53 435 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 TUBA1CQ9BQE3 449 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 CLSTN3Q9BQT9 956 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 ZDHHC6Q9H6R6 413 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 GPN2Q9H9Y4 310 aaPredicted RBP8.91□□□□□ -0.98
TOP1-201ENST00000361337 SCUBE2Q9NQ36 999 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 PAK6Q9NQU5 681 aaPredicted RBP8.91□□□□□ -0.98
TOP1-201ENST00000361337 OSER1Q9NX31 292 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 GALPQ9UBC7 116 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 ASXL3Q9C0F0 2248 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 E5RI56 91 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 GRM6O15303 877 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 TGM5O43548 720 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 MATN4O95460 622 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 SOD2P04179 222 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 JUNBP17275 347 aaPredicted RBP8.91□□□□□ -0.98
TOP1-201ENST00000361337 GTF2E2P29084 291 aaKnown RBP8.91□□□□□ -0.98
TOP1-201ENST00000361337 AKT1P31749 480 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 VIPR2P41587 438 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 DGKQP52824 942 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 AIF1P55008 147 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 KCNK10P57789 538 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 TEAD2Q15562 447 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 RAB41Q5JT25 222 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 PRMT9Q6P2P2 845 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 SCD5Q86SK9 330 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 LRRC20Q8TCA0 184 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 SORCS1Q8WY21 1168 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.91□□□□□ -0.982e-6■■■■■ 61.5
TOP1-201ENST00000361337 OTULINQ96BN8 352 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 TRMOQ9BU70 441 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 TRIM54Q9BYV2 358 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 ATP13A3Q9H7F0 1226 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 CLDND1Q9NY35 253 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 UBA2Q9UBT2 640 aaPredicted RBP8.91□□□□□ -0.98
TOP1-201ENST00000361337 FAM50BQ9Y247 325 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 DNMT3AQ9Y6K1 912 aaPredicted RBP8.91□□□□□ -0.98
TOP1-201ENST00000361337 TRPM7Q96QT4 1865 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 TRAV19A0A0A6YYK7 116 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 CCDC154A6NI56 674 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 COCHO43405 550 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 FGF4P08620 206 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 SERPINF2P08697 491 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 CHRM5P08912 532 aaPredicted RBP8.91□□□□□ -0.98
TOP1-201ENST00000361337 THRBP10828 461 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 PBX2P40425 430 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 RENBPP51606 427 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 ALDH3A2P51648 485 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 RAB25P57735 213 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 SNRPD2P62316 118 aaKnown RBP8.91□□□□□ -0.98
TOP1-201ENST00000361337 CD47Q08722 323 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 TRIM71Q2Q1W2 868 aaKnown RBP8.91□□□□□ -0.98
TOP1-201ENST00000361337 KLHL17Q6TDP4 642 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 KIAA0408Q6ZU52 694 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 TMEM179BQ7Z7N9 219 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 SYVN1Q86TM6 617 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 TRIM48Q8IWZ4 208 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 OR13C4Q8NGS5 318 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 FRS2Q8WU20 508 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 ASB12Q8WXK4 309 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 ZHX1-C8orf76Q96EF9 292 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 TCEAL4Q96EI5 215 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 SMIM14Q96QK8 99 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 GFM1Q96RP9 751 aaKnown RBP8.91□□□□□ -0.98
TOP1-201ENST00000361337 ZNF347Q96SE7 839 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 ATOH8Q96SQ7 321 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 FEM1AQ9BSK4 669 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 MROQ9BYG7 248 aa8.91□□□□□ -0.98
TOP1-201ENST00000361337 SLC7A5P2Q9GIP4 190 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms