RNA–Protein interactions for RNA: YLR182W

SWI6, Transcript of Transcription cofactor, yeast

Gene SWI6, Length 2,412 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWI6	YLR182W	YKL151C	P36059	337 aa		2.76	□□□□□ -1.97
SWI6	YLR182W	MBP1	P39678	833 aa		2.76	□□□□□ -1.97
SWI6	YLR182W	IOC3	P43596	787 aa		2.76	□□□□□ -1.97
SWI6	YLR182W	YGL176C	P46945	554 aa		2.76	□□□□□ -1.97
SWI6	YLR182W	PFD1	P46988	109 aa		2.76	□□□□□ -1.97
SWI6	YLR182W	ENT3	P47160	408 aa		2.76	□□□□□ -1.97
SWI6	YLR182W	TMA46	Q12000	345 aa	Known RBP	2.76	□□□□□ -1.97
SWI6	YLR182W	RPL11A	P0C0W9	174 aa	Known RBP	2.75	□□□□□ -1.97
SWI6	YLR182W	VBA5	P36172	582 aa		2.75	□□□□□ -1.97
SWI6	YLR182W	SPF1	P39986	1215 aa	Known RBP	2.75	□□□□□ -1.97
SWI6	YLR182W	CIT3	P43635	486 aa		2.75	□□□□□ -1.97
SWI6	YLR182W	RCM1	P53972	490 aa		2.75	□□□□□ -1.97
SWI6	YLR182W	LAP2	Q10740	671 aa		2.75	□□□□□ -1.97
SWI6	YLR182W	LPX1	Q12405	387 aa	Known RBP	2.75	□□□□□ -1.97
SWI6	YLR182W	RPL11B	Q3E757	174 aa	Predicted RBP	2.75	□□□□□ -1.97
SWI6	YLR182W	CLN2	P20438	545 aa		2.74	□□□□□ -1.97
SWI6	YLR182W	VPS53	P47061	822 aa		2.74	□□□□□ -1.97
SWI6	YLR182W	NOP7	P53261	605 aa	Known RBP	2.74	□□□□□ -1.97
SWI6	YLR182W	MCM7	P38132	845 aa		2.74	□□□□□ -1.97
SWI6	YLR182W	RGD1	P38339	666 aa		2.74	□□□□□ -1.97
SWI6	YLR182W	YHR020W	P38708	688 aa	Known RBP	2.74	□□□□□ -1.97
SWI6	YLR182W	OCA5	P38738	679 aa		2.74	□□□□□ -1.97
SWI6	YLR182W	MTC3	P53077	123 aa		2.74	□□□□□ -1.97
SWI6	YLR182W	CWC24	P53769	259 aa		2.74	□□□□□ -1.97
SWI6	YLR182W	SSY1	Q03770	852 aa		2.74	□□□□□ -1.97
SWI6	YLR182W	TRE1	Q08919	783 aa		2.74	□□□□□ -1.97
SWI6	YLR182W	FAL1	Q12099	399 aa	Known RBP	2.74	□□□□□ -1.97
SWI6	YLR182W	COQ2	P32378	372 aa		2.73	□□□□□ -1.97
SWI6	YLR182W	PNT1	P38969	423 aa		2.73	□□□□□ -1.97
SWI6	YLR182W	RIB2	Q12362	591 aa	Known RBP	2.73	□□□□□ -1.97
SWI6	YLR182W	MSB1	P21339	1137 aa	Known RBP	2.73	□□□□□ -1.97
SWI6	YLR182W	AGP1	P25376	633 aa		2.73	□□□□□ -1.97
SWI6	YLR182W	AFR1	P33304	620 aa		2.73	□□□□□ -1.97
SWI6	YLR182W	SLA2	P33338	968 aa		2.73	□□□□□ -1.97
SWI6	YLR182W	LRG1	P35688	1017 aa		2.73	□□□□□ -1.97
SWI6	YLR182W	YBR184W	P38299	523 aa		2.73	□□□□□ -1.97
SWI6	YLR182W	NPP2	P39997	493 aa		2.73	□□□□□ -1.97
SWI6	YLR182W	SRM1	P21827	482 aa		2.72	□□□□□ -1.97
SWI6	YLR182W	RAD27	P26793	382 aa		2.72	□□□□□ -1.97
SWI6	YLR182W	TOS1	P38288	455 aa		2.72	□□□□□ -1.97
SWI6	YLR182W	PTC7	P38797	343 aa		2.72	□□□□□ -1.97
SWI6	YLR182W	HOS3	Q02959	697 aa	Known RBP	2.72	□□□□□ -1.97
SWI6	YLR182W	BRE4	Q07660	1125 aa		2.72	□□□□□ -1.97
SWI6	YLR182W	GNT1	Q12096	491 aa		2.72	□□□□□ -1.97
SWI6	YLR182W	PRO1	P32264	428 aa		2.72	□□□□□ -1.97
SWI6	YLR182W	ERT1	P38140	529 aa		2.72	□□□□□ -1.97
SWI6	YLR182W	YHL012W	P38709	493 aa		2.72	□□□□□ -1.97
SWI6	YLR182W	ORC1	P54784	914 aa	Predicted RBP	2.72	□□□□□ -1.97
SWI6	YLR182W	MED7	Q08278	222 aa		2.72	□□□□□ -1.97
SWI6	YLR182W	YPL260W	Q08977	551 aa		2.72	□□□□□ -1.97
SWI6	YLR182W	YDL177C	Q12257	170 aa		2.72	□□□□□ -1.97
SWI6	YLR182W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	2.71	□□□□□ -1.98	not detected
SWI6	YLR182W	HSE1	P38753	452 aa		2.71	□□□□□ -1.98
SWI6	YLR182W	GTS1	P40956	396 aa		2.71	□□□□□ -1.98
SWI6	YLR182W	SHE9	Q04172	456 aa		2.71	□□□□□ -1.98
SWI6	YLR182W	RKM4	Q12504	494 aa		2.71	□□□□□ -1.98
SWI6	YLR182W	BI4	P03879	638 aa		2.71	□□□□□ -1.98
SWI6	YLR182W	HBS1	P32769	611 aa	Known RBP	2.71	□□□□□ -1.98
SWI6	YLR182W	YKL107W	P34251	309 aa		2.71	□□□□□ -1.98
SWI6	YLR182W	UGA2	P38067	497 aa		2.71	□□□□□ -1.98
SWI6	YLR182W	RPN3	P40016	523 aa	Known RBP	2.71	□□□□□ -1.98
SWI6	YLR182W	HRQ1	Q05549	1077 aa		2.71	□□□□□ -1.98
SWI6	YLR182W	TDA5	Q06417	326 aa	Known RBP	2.71	□□□□□ -1.98
SWI6	YLR182W	RSC58	Q07979	502 aa		2.71	□□□□□ -1.98
SWI6	YLR182W	XYL2	Q07993	356 aa		2.71	□□□□□ -1.98
SWI6	YLR182W	YOR059C	Q08448	450 aa	Known RBP	2.71	□□□□□ -1.98
SWI6	YLR182W	SBA1	P28707	216 aa	Known RBP	2.7	□□□□□ -1.98
SWI6	YLR182W	HSP78	P33416	811 aa		2.7	□□□□□ -1.98
SWI6	YLR182W	ATG14	P38270	344 aa		2.7	□□□□□ -1.98
SWI6	YLR182W	HNT2	P49775	206 aa		2.7	□□□□□ -1.98
SWI6	YLR182W	ORC3	P54790	616 aa		2.7	□□□□□ -1.98
SWI6	YLR182W	BDF2	Q07442	638 aa		2.7	□□□□□ -1.98
SWI6	YLR182W	HRK1	Q08732	759 aa	Known RBP	2.7	□□□□□ -1.98
SWI6	YLR182W	OMA1	P36163	345 aa		2.7	□□□□□ -1.98
SWI6	YLR182W	HUL5	P53119	910 aa		2.7	□□□□□ -1.98
SWI6	YLR182W	BUL2	Q03758	920 aa	Known RBP	2.7	□□□□□ -1.98
SWI6	YLR182W	PPM2	Q08282	695 aa		2.7	□□□□□ -1.98
SWI6	YLR182W	RAD4	P14736	754 aa		2.69	□□□□□ -1.98
SWI6	YLR182W	NPP1	P25353	742 aa		2.69	□□□□□ -1.98
SWI6	YLR182W	RPL8B	P29453	256 aa	Known RBP	2.69	□□□□□ -1.98
SWI6	YLR182W	TSA1	P34760	196 aa	Known RBP	2.69	□□□□□ -1.98
SWI6	YLR182W	SPO20	Q04359	397 aa		2.69	□□□□□ -1.98
SWI6	YLR182W	WRS1	Q12109	432 aa	Known RBP	2.69	□□□□□ -1.98
SWI6	YLR182W	TOP3	P13099	656 aa		2.69	□□□□□ -1.98
SWI6	YLR182W	ACE2	P21192	770 aa		2.69	□□□□□ -1.98
SWI6	YLR182W	SRO9	P25567	434 aa	Known RBP	2.69	□□□□□ -1.98
SWI6	YLR182W	AIM26	P32858	118 aa		2.69	□□□□□ -1.98
SWI6	YLR182W	MDL2	P33311	773 aa		2.69	□□□□□ -1.98
SWI6	YLR182W	IRR1	P40541	1150 aa		2.69	□□□□□ -1.98
SWI6	YLR182W	BUD6	P41697	788 aa		2.69	□□□□□ -1.98
SWI6	YLR182W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	not detected
SWI6	YLR182W	UBX5	Q06682	500 aa		2.69	□□□□□ -1.98
SWI6	YLR182W	FMP25	Q08023	583 aa		2.69	□□□□□ -1.98
SWI6	YLR182W	ACM1	Q08981	209 aa		2.69	□□□□□ -1.98
SWI6	YLR182W	NAP1	P25293	417 aa	Known RBP	2.68	□□□□□ -1.98
SWI6	YLR182W	ADP1	P25371	1049 aa		2.68	□□□□□ -1.98
SWI6	YLR182W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	2.68	□□□□□ -1.98	not detected
SWI6	YLR182W	BET3	P36149	193 aa		2.68	□□□□□ -1.98
SWI6	YLR182W	ETP1	P38748	585 aa	Known RBP	2.68	□□□□□ -1.98
SWI6	YLR182W	PLB2	Q03674	706 aa		2.68	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms