RNA–Protein interactions for RNA: YKL119C

VPH2, Transcript of Integral membrane protein required for V-ATPase function, yeast

Gene VPH2, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPH2	YKL119C	MEF2	P39677	819 aa		4.72	□□□□□ -1.65
VPH2	YKL119C	YFL054C	P43549	646 aa		4.72	□□□□□ -1.65
VPH2	YKL119C	GCN5	Q03330	439 aa		4.72	□□□□□ -1.65
VPH2	YKL119C	PIK1	P39104	1066 aa		4.71	□□□□□ -1.66
VPH2	YKL119C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
VPH2	YKL119C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
VPH2	YKL119C	PLB2	Q03674	706 aa		4.7	□□□□□ -1.66
VPH2	YKL119C	TUB2	P02557	457 aa	Known RBP	4.69	□□□□□ -1.66
VPH2	YKL119C	PRE9	P23638	258 aa	Known RBP	4.69	□□□□□ -1.66
VPH2	YKL119C	SEC20	P28791	383 aa		4.69	□□□□□ -1.66
VPH2	YKL119C	TAT2	P38967	592 aa		4.69	□□□□□ -1.66
VPH2	YKL119C	RPN3	P40016	523 aa	Known RBP	4.69	□□□□□ -1.66
VPH2	YKL119C	MRPS18	P42847	217 aa		4.69	□□□□□ -1.66
VPH2	YKL119C	HNT2	P49775	206 aa		4.69	□□□□□ -1.66
VPH2	YKL119C	YPL260W	Q08977	551 aa		4.69	□□□□□ -1.66
VPH2	YKL119C	GAL10	P04397	699 aa		4.68	□□□□□ -1.66
VPH2	YKL119C	CMP2	P14747	604 aa		4.68	□□□□□ -1.66
VPH2	YKL119C	MKK2	P32491	506 aa		4.68	□□□□□ -1.66
VPH2	YKL119C	YGR122W	P53272	402 aa		4.68	□□□□□ -1.66
VPH2	YKL119C	GSF2	Q04697	403 aa	Known RBP	4.68	□□□□□ -1.66
VPH2	YKL119C	MCD1	Q12158	566 aa		4.68	□□□□□ -1.66
VPH2	YKL119C	TAF13	P11747	167 aa		4.67	□□□□□ -1.66
VPH2	YKL119C	SRM1	P21827	482 aa		4.67	□□□□□ -1.66
VPH2	YKL119C	RPS26A	P39938	119 aa	Known RBP	4.67	□□□□□ -1.66
VPH2	YKL119C	RPS26B	P39939	119 aa	Known RBP	4.67	□□□□□ -1.66
VPH2	YKL119C	SIW14	P53965	281 aa		4.67	□□□□□ -1.66
VPH2	YKL119C	RSM24	Q03976	319 aa		4.67	□□□□□ -1.66
VPH2	YKL119C	MRL1	Q06815	381 aa		4.67	□□□□□ -1.66
VPH2	YKL119C	RAD2	P07276	1031 aa		4.66	□□□□□ -1.66
VPH2	YKL119C	YER152C	P10356	443 aa		4.66	□□□□□ -1.66
VPH2	YKL119C	RFC5	P38251	354 aa		4.66	□□□□□ -1.66
VPH2	YKL119C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
VPH2	YKL119C	DUS4	Q06063	367 aa		4.66	□□□□□ -1.66
VPH2	YKL119C	RIB2	Q12362	591 aa	Known RBP	4.66	□□□□□ -1.66
VPH2	YKL119C	MLS1	P30952	554 aa		4.65	□□□□□ -1.67
VPH2	YKL119C	SEC8	P32855	1065 aa		4.65	□□□□□ -1.67
VPH2	YKL119C	HXT13	P39924	564 aa		4.65	□□□□□ -1.67
VPH2	YKL119C	HXT17	P53631	564 aa		4.65	□□□□□ -1.67
VPH2	YKL119C	HXT15	P54854	567 aa		4.65	□□□□□ -1.67
VPH2	YKL119C	CYC8	P14922	966 aa		4.64	□□□□□ -1.67
VPH2	YKL119C	SYP1	P25623	870 aa	Known RBP	4.64	□□□□□ -1.67
VPH2	YKL119C	MCM2	P29469	868 aa		4.64	□□□□□ -1.67
VPH2	YKL119C	RGD1	P38339	666 aa		4.64	□□□□□ -1.67
VPH2	YKL119C	GNP1	P48813	663 aa		4.64	□□□□□ -1.67
VPH2	YKL119C	TMA10	Q06177	86 aa		4.64	□□□□□ -1.67
VPH2	YKL119C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
VPH2	YKL119C	SVS1	Q12254	260 aa		4.64	□□□□□ -1.67
VPH2	YKL119C	CDC20	P26309	610 aa		4.63	□□□□□ -1.67
VPH2	YKL119C	APL1	P27351	700 aa		4.63	□□□□□ -1.67
VPH2	YKL119C	SEN54	Q02825	467 aa	Predicted RBP	4.63	□□□□□ -1.67
VPH2	YKL119C	GPB1	Q08886	897 aa		4.63	□□□□□ -1.67
VPH2	YKL119C	PNS1	Q12412	539 aa		4.63	□□□□□ -1.67
VPH2	YKL119C	GCR1	P07261	785 aa		4.62	□□□□□ -1.67
VPH2	YKL119C	DOM34	P33309	386 aa		4.62	□□□□□ -1.67
VPH2	YKL119C	CNN1	P43618	361 aa		4.62	□□□□□ -1.67
VPH2	YKL119C	GTF1	P53260	183 aa	Predicted RBP	4.62	□□□□□ -1.67
VPH2	YKL119C	RXT3	Q07458	294 aa		4.62	□□□□□ -1.67
VPH2	YKL119C	ACK1	Q07622	623 aa	Predicted RBP	4.62	□□□□□ -1.67
VPH2	YKL119C	KIN2	P13186	1147 aa	Known RBP	4.61	□□□□□ -1.67
VPH2	YKL119C	DBP5	P20449	482 aa	Known RBP	4.61	□□□□□ -1.67
VPH2	YKL119C	SPR28	Q04921	423 aa		4.61	□□□□□ -1.67
VPH2	YKL119C	CDC6	P09119	513 aa		4.6	□□□□□ -1.67
VPH2	YKL119C	BAS1	P22035	811 aa		4.6	□□□□□ -1.67
VPH2	YKL119C	LST4	P34239	828 aa		4.6	□□□□□ -1.67
VPH2	YKL119C	ENT3	P47160	408 aa		4.6	□□□□□ -1.67
VPH2	YKL119C	GCV2	P49095	1034 aa		4.6	□□□□□ -1.67
VPH2	YKL119C	MCM6	P53091	1017 aa	Known RBP	4.6	□□□□□ -1.67
VPH2	YKL119C	YAP6	Q03935	383 aa		4.6	□□□□□ -1.67
VPH2	YKL119C	HCM1	P25364	564 aa		4.59	□□□□□ -1.67
VPH2	YKL119C	TRM2	P33753	639 aa		4.59	□□□□□ -1.67
VPH2	YKL119C	MCM7	P38132	845 aa		4.59	□□□□□ -1.67
VPH2	YKL119C	MXR1	P40029	184 aa		4.59	□□□□□ -1.67
VPH2	YKL119C	MPH1	P40562	993 aa		4.59	□□□□□ -1.67
VPH2	YKL119C	POL32	P47110	350 aa		4.59	□□□□□ -1.67
VPH2	YKL119C	ATE1	P16639	503 aa		4.58	□□□□□ -1.68
VPH2	YKL119C	MGE1	P38523	228 aa		4.58	□□□□□ -1.68
VPH2	YKL119C	FYV10	P40492	516 aa		4.58	□□□□□ -1.68
VPH2	YKL119C	PBP1	P53297	722 aa	Known RBP	4.58	□□□□□ -1.68
VPH2	YKL119C	TAF7	Q05021	590 aa		4.58	□□□□□ -1.68
VPH2	YKL119C	PUS9	Q12069	462 aa		4.58	□□□□□ -1.68
VPH2	YKL119C	EMC1	P25574	760 aa		4.57	□□□□□ -1.68
VPH2	YKL119C	SLD2	P34252	453 aa		4.57	□□□□□ -1.68
VPH2	YKL119C	UGA2	P38067	497 aa		4.57	□□□□□ -1.68
VPH2	YKL119C	MSE1	P48525	536 aa		4.57	□□□□□ -1.68
VPH2	YKL119C	MNN10	P50108	393 aa	Known RBP	4.57	□□□□□ -1.68
VPH2	YKL119C	VPS62	P53285	467 aa		4.57	□□□□□ -1.68
VPH2	YKL119C	GIS1	Q03833	894 aa		4.57	□□□□□ -1.68
VPH2	YKL119C	TIF35	Q04067	274 aa	Known RBP	4.57	□□□□□ -1.68
VPH2	YKL119C	YLR224W	Q05947	369 aa		4.57	□□□□□ -1.68
VPH2	YKL119C	RER2	P35196	286 aa		4.56	□□□□□ -1.68
VPH2	YKL119C	PHO23	P50947	330 aa		4.56	□□□□□ -1.68
VPH2	YKL119C	SUN4	P53616	420 aa		4.56	□□□□□ -1.68
VPH2	YKL119C	SIZ1	Q04195	904 aa		4.56	□□□□□ -1.68
VPH2	YKL119C	BI4	P03879	638 aa		4.55	□□□□□ -1.68
VPH2	YKL119C	RPL11A	P0C0W9	174 aa	Known RBP	4.55	□□□□□ -1.68
VPH2	YKL119C	ACE2	P21192	770 aa		4.55	□□□□□ -1.68
VPH2	YKL119C	STE11	P23561	717 aa		4.55	□□□□□ -1.68
VPH2	YKL119C	PEP7	P32609	515 aa		4.55	□□□□□ -1.68
VPH2	YKL119C	MSC2	Q03455	724 aa		4.55	□□□□□ -1.68
VPH2	YKL119C	ATG13	Q06628	738 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 68.7 ms