RNA–Protein interactions for RNA: ENST00000640807.1

KCNMA1-289, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-289ENST00000640807 SLFN5Q08AF3 891 aa15.39■□□□□ 0.05
KCNMA1-289ENST00000640807 TTC5Q8N0Z6 440 aa15.39■□□□□ 0.05
KCNMA1-289ENST00000640807 RGS12O14924 1447 aa15.39■□□□□ 0.05
KCNMA1-289ENST00000640807 TSR2Q969E8 191 aaKnown RBP15.39■□□□□ 0.05
KCNMA1-289ENST00000640807 CHL1O00533 1208 aa15.38■□□□□ 0.05
KCNMA1-289ENST00000640807 SPINK5Q9NQ38 1064 aaPredicted RBP15.38■□□□□ 0.05
KCNMA1-289ENST00000640807 BABAM1Q9NWV8 329 aa15.38■□□□□ 0.05
KCNMA1-289ENST00000640807 SHANK3Q9BYB0 1731 aa15.38■□□□□ 0.05
KCNMA1-289ENST00000640807 MBIPQ9NS73 344 aa15.38■□□□□ 0.05
KCNMA1-289ENST00000640807 PIGBQ92521 554 aa15.37■□□□□ 0.05
KCNMA1-289ENST00000640807 ZNF853P0CG23 659 aa15.36■□□□□ 0.05
KCNMA1-289ENST00000640807 SLC39A6Q13433 755 aa15.36■□□□□ 0.05
KCNMA1-289ENST00000640807 CENPBP07199 599 aaPredicted RBP15.36■□□□□ 0.05
KCNMA1-289ENST00000640807 KCNQ2O43526 872 aa15.36■□□□□ 0.05
KCNMA1-289ENST00000640807 SCN11AQ9UI33 1791 aa15.36■□□□□ 0.05
KCNMA1-289ENST00000640807 FANCIQ9NVI1 1328 aa15.36■□□□□ 0.05
KCNMA1-289ENST00000640807 ZNF790Q6PG37 636 aa15.35■□□□□ 0.05
KCNMA1-289ENST00000640807 DUSP27Q5VZP5 1158 aa15.35■□□□□ 0.05
KCNMA1-289ENST00000640807 BRWD3Q6RI45 1802 aa15.33■□□□□ 0.05
KCNMA1-289ENST00000640807 TRIM37O94972 964 aa15.33■□□□□ 0.05
KCNMA1-289ENST00000640807 PTCD1O75127 700 aaKnown RBP15.33■□□□□ 0.04
KCNMA1-289ENST00000640807 EXOSC9Q06265 439 aaKnown RBP15.33■□□□□ 0.04
KCNMA1-289ENST00000640807 ASAP1Q9ULH1 1129 aa15.33■□□□□ 0.04
KCNMA1-289ENST00000640807 BCL9O00512 1426 aa15.33■□□□□ 0.04
KCNMA1-289ENST00000640807 ELL2O00472 640 aaPredicted RBP15.33■□□□□ 0.04
KCNMA1-289ENST00000640807 KCNQ3O43525 872 aa15.33■□□□□ 0.04
KCNMA1-289ENST00000640807 SMARCC1Q92922 1105 aaPredicted RBP15.33■□□□□ 0.04
KCNMA1-289ENST00000640807 FMNL2Q96PY5 1086 aa15.32■□□□□ 0.04
KCNMA1-289ENST00000640807 RBM42Q9BTD8 480 aaKnown RBP15.32■□□□□ 0.04
KCNMA1-289ENST00000640807 BCL11BQ9C0K0 894 aaPredicted RBP15.32■□□□□ 0.04
KCNMA1-289ENST00000640807 TRMT2AQ8IZ69 625 aaKnown RBP15.32■□□□□ 0.04
KCNMA1-289ENST00000640807 VIRMAQ69YN4 1812 aaKnown RBP15.31■□□□□ 0.04
KCNMA1-289ENST00000640807 ADAMTS7Q9UKP4 1686 aa15.31■□□□□ 0.04
KCNMA1-289ENST00000640807 MRC1P22897 1456 aa15.31■□□□□ 0.04
KCNMA1-289ENST00000640807 ATG3Q9NT62 314 aa15.31■□□□□ 0.04
KCNMA1-289ENST00000640807 EIF4A1P60842 406 aaKnown RBP15.3■□□□□ 0.04
KCNMA1-289ENST00000640807 ZNF496Q96IT1 587 aaPredicted RBP15.3■□□□□ 0.04
KCNMA1-289ENST00000640807 DOT1LQ8TEK3 1739 aa15.3■□□□□ 0.04
KCNMA1-289ENST00000640807 TWISTNBQ3B726 338 aaPredicted RBP15.3■□□□□ 0.04
KCNMA1-289ENST00000640807 KRT24Q2M2I5 525 aa15.29■□□□□ 0.04
KCNMA1-289ENST00000640807 PTF1AQ7RTS3 328 aa15.29■□□□□ 0.04
KCNMA1-289ENST00000640807 C8orf58Q8NAV2 365 aa15.29■□□□□ 0.04
KCNMA1-289ENST00000640807 CHMP4AQ9BY43 222 aa15.29■□□□□ 0.04
KCNMA1-289ENST00000640807 TOGARAM1Q9Y4F4 1720 aa15.29■□□□□ 0.04
KCNMA1-289ENST00000640807 SF3B2Q13435 895 aaKnown RBP15.28■□□□□ 0.04
KCNMA1-289ENST00000640807 ITGB4P16144 1822 aa15.28■□□□□ 0.04
KCNMA1-289ENST00000640807 SNRPA1P09661 255 aaKnown RBP15.28■□□□□ 0.04
KCNMA1-289ENST00000640807 APBA3O96018 575 aa15.27■□□□□ 0.04
KCNMA1-289ENST00000640807 CT47B1P0C2W7 299 aaPredicted RBP15.27■□□□□ 0.04
KCNMA1-289ENST00000640807 TSPYL6Q8N831 410 aa15.27■□□□□ 0.04
KCNMA1-289ENST00000640807 PALLDQ8WX93 1383 aa15.27■□□□□ 0.03
KCNMA1-289ENST00000640807 EIF2S2P20042 333 aaKnown RBP15.27■□□□□ 0.03
KCNMA1-289ENST00000640807 GIGYF1O75420 1035 aaPredicted RBP15.26■□□□□ 0.03
KCNMA1-289ENST00000640807 TEX13AQ9BXU3 409 aaPredicted RBP15.26■□□□□ 0.03
KCNMA1-289ENST00000640807 LOC102724428A0A0B4J2F2 783 aa15.25■□□□□ 0.03
KCNMA1-289ENST00000640807 SIK1P57059 783 aa15.25■□□□□ 0.03
KCNMA1-289ENST00000640807 HOXB7P09629 217 aa15.25■□□□□ 0.03
KCNMA1-289ENST00000640807 ATP6V1AP38606 617 aa15.25■□□□□ 0.03
KCNMA1-289ENST00000640807 HDGFL1Q5TGJ6 251 aa15.25■□□□□ 0.03
KCNMA1-289ENST00000640807 SIPA1L3O60292 1781 aaPredicted RBP15.25■□□□□ 0.03
KCNMA1-289ENST00000640807 SOS1Q07889 1333 aaPredicted RBP15.25■□□□□ 0.03
KCNMA1-289ENST00000640807 HEG1Q9ULI3 1381 aa15.25■□□□□ 0.03
KCNMA1-289ENST00000640807 VAMP4O75379 141 aa15.25■□□□□ 0.03
KCNMA1-289ENST00000640807 NECTIN2Q92692 538 aa15.25■□□□□ 0.03
KCNMA1-289ENST00000640807 VSIG10Q8N0Z9 540 aa15.24■□□□□ 0.03
KCNMA1-289ENST00000640807 ZNF428Q96B54 188 aa15.24■□□□□ 0.03
KCNMA1-289ENST00000640807 STK31Q9BXU1 1019 aa15.24■□□□□ 0.03
KCNMA1-289ENST00000640807 EP400Q96L91 3159 aa15.24■□□□□ 0.03
KCNMA1-289ENST00000640807 STARD3NLO95772 234 aa15.24■□□□□ 0.03
KCNMA1-289ENST00000640807 CCDC30Q5VVM6 783 aa15.24■□□□□ 0.03
KCNMA1-289ENST00000640807 RCAN3Q9UKA8 241 aa15.24■□□□□ 0.03
KCNMA1-289ENST00000640807 NHSQ6T4R5 1651 aa15.23■□□□□ 0.03
KCNMA1-289ENST00000640807 CCNL1Q9UK58 526 aaPredicted RBP15.23■□□□□ 0.03
KCNMA1-289ENST00000640807 SBF2Q86WG5 1849 aa15.23■□□□□ 0.03
KCNMA1-289ENST00000640807 TCERG1O14776 1098 aaKnown RBP15.22■□□□□ 0.03
KCNMA1-289ENST00000640807 DNAJC10Q8IXB1 793 aa15.22■□□□□ 0.03
KCNMA1-289ENST00000640807 KDM3BQ7LBC6 1761 aa15.22■□□□□ 0.03
KCNMA1-289ENST00000640807 PRAMEF22A3QJZ6 481 aa15.22■□□□□ 0.03
KCNMA1-289ENST00000640807 USP16Q9Y5T5 823 aa15.22■□□□□ 0.03
KCNMA1-289ENST00000640807 SMC4Q9NTJ3 1288 aa15.22■□□□□ 0.03
KCNMA1-289ENST00000640807 NPM2Q86SE8 214 aaKnown RBP15.21■□□□□ 0.03
KCNMA1-289ENST00000640807 BTAF1O14981 1849 aa15.21■□□□□ 0.03
KCNMA1-289ENST00000640807 BAG6P46379 1132 aa15.21■□□□□ 0.03
KCNMA1-289ENST00000640807 BCL2L13Q9BXK5 485 aa15.21■□□□□ 0.03
KCNMA1-289ENST00000640807 PLSCR1O15162 318 aa15.21■□□□□ 0.02
KCNMA1-289ENST00000640807 HMGB2P26583 209 aaKnown RBP15.21■□□□□ 0.02
KCNMA1-289ENST00000640807 KCNQ4P56696 695 aa15.2■□□□□ 0.02
KCNMA1-289ENST00000640807 CCDC125Q86Z20 511 aa15.2■□□□□ 0.02
KCNMA1-289ENST00000640807 SLC4A9Q96Q91 983 aa15.2■□□□□ 0.02
KCNMA1-289ENST00000640807 RARSP54136 660 aaKnown RBP15.19■□□□□ 0.02
KCNMA1-289ENST00000640807 ALDH1L2Q3SY69 923 aa15.19■□□□□ 0.02
KCNMA1-289ENST00000640807 KCPQ6ZWJ8 1503 aa15.19■□□□□ 0.02
KCNMA1-289ENST00000640807 SSH1Q8WYL5 1049 aa15.19■□□□□ 0.02
KCNMA1-289ENST00000640807 DBF4Q9UBU7 674 aaPredicted RBP15.19■□□□□ 0.02
KCNMA1-289ENST00000640807 SLC4A2P04920 1241 aa15.19■□□□□ 0.02
KCNMA1-289ENST00000640807 SLC27A3Q5K4L6 730 aa15.19■□□□□ 0.02
KCNMA1-289ENST00000640807 CANXP27824 592 aaKnown RBP15.18■□□□□ 0.02
KCNMA1-289ENST00000640807 TXNRD1Q16881 649 aa15.18■□□□□ 0.02
KCNMA1-289ENST00000640807 ZNF330Q9Y3S2 320 aaPredicted RBP15.18■□□□□ 0.02
KCNMA1-289ENST00000640807 ITPK1Q13572 414 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms