RNA–Protein interactions for RNA: ENST00000639844.1

RPS27A-211, Transcript of ribosomal protein S27a, humanhuman

TSL 5 BASIC

Gene RPS27A, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-211ENST00000639844 PPP2R1AP30153 589 aa25.7■■□□□ 1.7
RPS27A-211ENST00000639844 COL24A1Q17RW2 1714 aa25.7■■□□□ 1.7
RPS27A-211ENST00000639844 MSH5O43196 834 aa25.69■■□□□ 1.7
RPS27A-211ENST00000639844 POLD1P28340 1107 aa25.69■■□□□ 1.7
RPS27A-211ENST00000639844 NFATC2IPQ8NCF5 419 aa25.69■■□□□ 1.7
RPS27A-211ENST00000639844 ITPK1Q13572 414 aa25.68■■□□□ 1.7
RPS27A-211ENST00000639844 MTHFSDQ2M296 383 aaKnown RBP25.68■■□□□ 1.7
RPS27A-211ENST00000639844 LINC00116Q8NCU8 138 aa25.68■■□□□ 1.7
RPS27A-211ENST00000639844 FHDC1Q9C0D6 1143 aaPredicted RBP25.68■■□□□ 1.7
RPS27A-211ENST00000639844 ZNF831Q5JPB2 1677 aa25.68■■□□□ 1.7
RPS27A-211ENST00000639844 SCN11AQ9UI33 1791 aa25.67■■□□□ 1.7
RPS27A-211ENST00000639844 SYT17Q9BSW7 474 aa25.67■■□□□ 1.7
RPS27A-211ENST00000639844 RBM42Q9BTD8 480 aaKnown RBP25.66■■□□□ 1.7
RPS27A-211ENST00000639844 DCAF8L1A6NGE4 600 aa25.65■■□□□ 1.7
RPS27A-211ENST00000639844 NUDCQ9Y266 331 aa25.65■■□□□ 1.7
RPS27A-211ENST00000639844 MAP3K5Q99683 1374 aa25.65■■□□□ 1.7
RPS27A-211ENST00000639844 SSFA2P28290 1259 aa25.64■■□□□ 1.7
RPS27A-211ENST00000639844 SLC4A9Q96Q91 983 aa25.64■■□□□ 1.7
RPS27A-211ENST00000639844 LGR6Q9HBX8 967 aa25.64■■□□□ 1.7
RPS27A-211ENST00000639844 RNMTO43148 476 aaKnown RBP25.63■■□□□ 1.69
RPS27A-211ENST00000639844 SLC52A2Q9HAB3 445 aa25.63■■□□□ 1.69
RPS27A-211ENST00000639844 UBR3Q6ZT12 1888 aa25.63■■□□□ 1.69
RPS27A-211ENST00000639844 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.62■■□□□ 1.69
RPS27A-211ENST00000639844 AMIGO3Q86WK7 504 aa25.62■■□□□ 1.69
RPS27A-211ENST00000639844 ADAMTS7Q9UKP4 1686 aa25.61■■□□□ 1.69
RPS27A-211ENST00000639844 MRC1P22897 1456 aa25.6■■□□□ 1.69
RPS27A-211ENST00000639844 GNPATO15228 680 aa25.6■■□□□ 1.69
RPS27A-211ENST00000639844 PHF14O94880 888 aa25.6■■□□□ 1.69
RPS27A-211ENST00000639844 RC3H1Q5TC82 1133 aaKnown RBP25.6■■□□□ 1.69
RPS27A-211ENST00000639844 GAS2L2Q8NHY3 880 aa25.6■■□□□ 1.69
RPS27A-211ENST00000639844 PTCD1O75127 700 aaKnown RBP25.59■■□□□ 1.69
RPS27A-211ENST00000639844 MSL1Q68DK7 614 aa25.58■■□□□ 1.69
RPS27A-211ENST00000639844 RSPH6AQ9H0K4 717 aa25.58■■□□□ 1.69
RPS27A-211ENST00000639844 PRKAR2BP31323 418 aa25.57■■□□□ 1.68
RPS27A-211ENST00000639844 CNTNAP4Q9C0A0 1308 aa25.57■■□□□ 1.68
RPS27A-211ENST00000639844 COL5A3P25940 1745 aaPredicted RBP25.57■■□□□ 1.68
RPS27A-211ENST00000639844 GNAT3A8MTJ3 354 aa25.56■■□□□ 1.68
RPS27A-211ENST00000639844 U2AF1L5P0DN76 240 aaPredicted RBP25.56■■□□□ 1.68
RPS27A-211ENST00000639844 U2AF1Q01081 240 aaKnown RBP eCLIP25.56■■□□□ 1.68
RPS27A-211ENST00000639844 SMIM5Q71RC9 77 aa25.56■■□□□ 1.68
RPS27A-211ENST00000639844 RTCBQ9Y3I0 505 aaKnown RBP25.56■■□□□ 1.68
RPS27A-211ENST00000639844 FCHSD2O94868 740 aa25.55■■□□□ 1.68
RPS27A-211ENST00000639844 VIRMAQ69YN4 1812 aaKnown RBP25.55■■□□□ 1.68
RPS27A-211ENST00000639844 CICQ96RK0 1608 aaPredicted RBP25.55■■□□□ 1.68
RPS27A-211ENST00000639844 PHACTR3Q96KR7 559 aa25.54■■□□□ 1.68
RPS27A-211ENST00000639844 ADRA2BP18089 450 aa25.53■■□□□ 1.68
RPS27A-211ENST00000639844 TRAPPC3LQ5T215 181 aa25.53■■□□□ 1.68
RPS27A-211ENST00000639844 KLHL34Q8N239 644 aa25.53■■□□□ 1.68
RPS27A-211ENST00000639844 RPS6KA4O75676 772 aa25.52■■□□□ 1.68
RPS27A-211ENST00000639844 IL17REQ8NFR9 667 aa25.52■■□□□ 1.68
RPS27A-211ENST00000639844 TJP1Q07157 1748 aa25.5■■□□□ 1.67
RPS27A-211ENST00000639844 TEFQ10587 303 aa25.5■■□□□ 1.67
RPS27A-211ENST00000639844 DDX10Q13206 875 aaKnown RBP25.5■■□□□ 1.67
RPS27A-211ENST00000639844 SLC39A6Q13433 755 aa25.5■■□□□ 1.67
RPS27A-211ENST00000639844 CRKLP46109 303 aaKnown RBP25.49■■□□□ 1.67
RPS27A-211ENST00000639844 RALBP1Q15311 655 aa25.49■■□□□ 1.67
RPS27A-211ENST00000639844 ARHGEF1Q92888 912 aaKnown RBP25.48■■□□□ 1.67
RPS27A-211ENST00000639844 KCPQ6ZWJ8 1503 aa25.47■■□□□ 1.67
RPS27A-211ENST00000639844 CEMIPQ8WUJ3 1361 aa25.47■■□□□ 1.67
RPS27A-211ENST00000639844 VSIG10Q8N0Z9 540 aa25.47■■□□□ 1.67
RPS27A-211ENST00000639844 CD2APQ9Y5K6 639 aa25.47■■□□□ 1.67
RPS27A-211ENST00000639844 MYH14Q7Z406 1995 aaKnown RBP25.47■■□□□ 1.67
RPS27A-211ENST00000639844 DNAJC10Q8IXB1 793 aa25.46■■□□□ 1.67
RPS27A-211ENST00000639844 TTC5Q8N0Z6 440 aa25.46■■□□□ 1.67
RPS27A-211ENST00000639844 NLGN2Q8NFZ4 835 aa25.46■■□□□ 1.67
RPS27A-211ENST00000639844 RFC4P35249 363 aa25.45■■□□□ 1.66
RPS27A-211ENST00000639844 NLGN1Q8N2Q7 840 aa25.45■■□□□ 1.66
RPS27A-211ENST00000639844 INTS5Q6P9B9 1019 aaKnown RBP25.44■■□□□ 1.66
RPS27A-211ENST00000639844 UBR2Q8IWV8 1755 aa25.44■■□□□ 1.66
RPS27A-211ENST00000639844 CYP19A1P11511 503 aaPredicted RBP25.43■■□□□ 1.66
RPS27A-211ENST00000639844 ZEB1P37275 1124 aaPredicted RBP25.43■■□□□ 1.66
RPS27A-211ENST00000639844 ZNF790Q6PG37 636 aa25.43■■□□□ 1.66
RPS27A-211ENST00000639844 CCDC87Q9NVE4 849 aa25.43■■□□□ 1.66
RPS27A-211ENST00000639844 SIPA1L3O60292 1781 aaPredicted RBP25.43■■□□□ 1.66
RPS27A-211ENST00000639844 HTATSF1O43719 755 aaKnown RBP25.42■■□□□ 1.66
RPS27A-211ENST00000639844 YY1P25490 414 aa25.42■■□□□ 1.66
RPS27A-211ENST00000639844 GPR162Q16538 588 aa25.42■■□□□ 1.66
RPS27A-211ENST00000639844 RTF1Q92541 710 aaKnown RBP25.42■■□□□ 1.66
RPS27A-211ENST00000639844 NEFMP07197 916 aa25.41■■□□□ 1.66
RPS27A-211ENST00000639844 GYS1P13807 737 aa25.41■■□□□ 1.66
RPS27A-211ENST00000639844 MMP10P09238 476 aa25.4■■□□□ 1.66
RPS27A-211ENST00000639844 C4AP0C0L4 1744 aa25.4■■□□□ 1.66
RPS27A-211ENST00000639844 UTRNP46939 3433 aa25.39■■□□□ 1.66
RPS27A-211ENST00000639844 ZNF496Q96IT1 587 aaPredicted RBP25.39■■□□□ 1.66
RPS27A-211ENST00000639844 PNNQ9H307 717 aaKnown RBP25.39■■□□□ 1.66
RPS27A-211ENST00000639844 BTBD11A6QL63 1104 aa25.38■■□□□ 1.65
RPS27A-211ENST00000639844 TEX13AQ9BXU3 409 aaPredicted RBP25.38■■□□□ 1.65
RPS27A-211ENST00000639844 USP42Q9H9J4 1324 aaKnown RBP25.37■■□□□ 1.65
RPS27A-211ENST00000639844 HEG1Q9ULI3 1381 aa25.37■■□□□ 1.65
RPS27A-211ENST00000639844 STARD3NLO95772 234 aa25.37■■□□□ 1.65
RPS27A-211ENST00000639844 PLEKHF1Q96S99 279 aa25.37■■□□□ 1.65
RPS27A-211ENST00000639844 SOS1Q07889 1333 aaPredicted RBP25.37■■□□□ 1.65
RPS27A-211ENST00000639844 MYBBP1AQ9BQG0 1328 aaKnown RBP25.37■■□□□ 1.65
RPS27A-211ENST00000639844 MCM10Q7L590 875 aa25.36■■□□□ 1.65
RPS27A-211ENST00000639844 FMNL2Q96PY5 1086 aa25.36■■□□□ 1.65
RPS27A-211ENST00000639844 PELP1Q8IZL8 1130 aaKnown RBP25.35■■□□□ 1.65
RPS27A-211ENST00000639844 ZBTB1Q9Y2K1 713 aa25.35■■□□□ 1.65
RPS27A-211ENST00000639844 SRP68Q9UHB9 627 aaKnown RBP25.34■■□□□ 1.65
RPS27A-211ENST00000639844 ZPR1O75312 459 aa25.32■■□□□ 1.64
RPS27A-211ENST00000639844 DCTN1Q14203 1278 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms