RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 RBM42Q9BTD8 480 aaKnown RBP22.23■■□□□ 1.15
COLCA2-207ENST00000639470 COL3A1P02461 1466 aaPredicted RBP22.22■■□□□ 1.15
COLCA2-207ENST00000639470 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.22■■□□□ 1.15
COLCA2-207ENST00000639470 CABP4P57796 275 aa22.22■■□□□ 1.15
COLCA2-207ENST00000639470 AMOTQ4VCS5 1084 aa22.22■■□□□ 1.15
COLCA2-207ENST00000639470 COL24A1Q17RW2 1714 aa22.22■■□□□ 1.15
COLCA2-207ENST00000639470 ERVV-2B6SEH9 535 aa22.21■■□□□ 1.15
COLCA2-207ENST00000639470 GNPATO15228 680 aa22.21■■□□□ 1.15
COLCA2-207ENST00000639470 C1orf141Q5JVX7 400 aa22.21■■□□□ 1.15
COLCA2-207ENST00000639470 LGR6Q9HBX8 967 aa22.21■■□□□ 1.15
COLCA2-207ENST00000639470 DIAPH1O60610 1272 aaKnown RBP22.2■■□□□ 1.14
COLCA2-207ENST00000639470 NFATC2IPQ8NCF5 419 aa22.2■■□□□ 1.14
COLCA2-207ENST00000639470 MAP3K5Q99683 1374 aa22.2■■□□□ 1.14
COLCA2-207ENST00000639470 PLEKHG2Q9H7P9 1386 aa22.2■■□□□ 1.14
COLCA2-207ENST00000639470 PTCD1O75127 700 aaKnown RBP22.19■■□□□ 1.14
COLCA2-207ENST00000639470 HSP90AB1P08238 724 aaKnown RBP22.19■■□□□ 1.14
COLCA2-207ENST00000639470 NPC1L1Q9UHC9 1359 aa22.19■■□□□ 1.14
COLCA2-207ENST00000639470 MTHFSDQ2M296 383 aaKnown RBP22.18■■□□□ 1.14
COLCA2-207ENST00000639470 UBR3Q6ZT12 1888 aa22.17■■□□□ 1.14
COLCA2-207ENST00000639470 PELP1Q8IZL8 1130 aaKnown RBP22.17■■□□□ 1.14
COLCA2-207ENST00000639470 DCAF8L1A6NGE4 600 aa22.16■■□□□ 1.14
COLCA2-207ENST00000639470 U2SURPO15042 1029 aaKnown RBP22.16■■□□□ 1.14
COLCA2-207ENST00000639470 SLC39A6Q13433 755 aa22.14■■□□□ 1.13
COLCA2-207ENST00000639470 AKAP4Q5JQC9 854 aa22.14■■□□□ 1.13
COLCA2-207ENST00000639470 WWC3Q9ULE0 1092 aa22.14■■□□□ 1.13
COLCA2-207ENST00000639470 RNMTO43148 476 aaKnown RBP22.13■■□□□ 1.13
COLCA2-207ENST00000639470 SSFA2P28290 1259 aa22.13■■□□□ 1.13
COLCA2-207ENST00000639470 FLAD1Q8NFF5 587 aa22.13■■□□□ 1.13
COLCA2-207ENST00000639470 YBX3P16989 372 aaKnown RBP eCLIP22.12■■□□□ 1.13
COLCA2-207ENST00000639470 GPR162Q16538 588 aa22.12■■□□□ 1.13
COLCA2-207ENST00000639470 SLC52A2Q9HAB3 445 aa22.1■■□□□ 1.13
COLCA2-207ENST00000639470 PPP2R1AP30153 589 aa22.09■■□□□ 1.13
COLCA2-207ENST00000639470 SCN11AQ9UI33 1791 aa22.08■■□□□ 1.13
COLCA2-207ENST00000639470 CRKLP46109 303 aaKnown RBP22.08■■□□□ 1.13
COLCA2-207ENST00000639470 ARHGEF1Q92888 912 aaKnown RBP22.08■■□□□ 1.13
COLCA2-207ENST00000639470 PHACTR3Q96KR7 559 aa22.08■■□□□ 1.13
COLCA2-207ENST00000639470 RTCBQ9Y3I0 505 aaKnown RBP22.08■■□□□ 1.13
COLCA2-207ENST00000639470 MRC1P22897 1456 aa22.08■■□□□ 1.12
COLCA2-207ENST00000639470 CNTNAP4Q9C0A0 1308 aa22.07■■□□□ 1.12
COLCA2-207ENST00000639470 COL5A3P25940 1745 aaPredicted RBP22.07■■□□□ 1.12
COLCA2-207ENST00000639470 DNAJC10Q8IXB1 793 aa22.07■■□□□ 1.12
COLCA2-207ENST00000639470 TJP1Q07157 1748 aa22.06■■□□□ 1.12
COLCA2-207ENST00000639470 SRP68Q9UHB9 627 aaKnown RBP22.06■■□□□ 1.12
COLCA2-207ENST00000639470 UTRNP46939 3433 aa22.06■■□□□ 1.12
COLCA2-207ENST00000639470 RPS6KA4O75676 772 aa22.05■■□□□ 1.12
COLCA2-207ENST00000639470 MMP10P09238 476 aa22.05■■□□□ 1.12
COLCA2-207ENST00000639470 PRKAR2BP31323 418 aa22.05■■□□□ 1.12
COLCA2-207ENST00000639470 TRAPPC3LQ5T215 181 aa22.05■■□□□ 1.12
COLCA2-207ENST00000639470 MYH14Q7Z406 1995 aaKnown RBP22.05■■□□□ 1.12
COLCA2-207ENST00000639470 RC3H1Q5TC82 1133 aaKnown RBP22.04■■□□□ 1.12
COLCA2-207ENST00000639470 INTS5Q6P9B9 1019 aaKnown RBP22.04■■□□□ 1.12
COLCA2-207ENST00000639470 IL17REQ8NFR9 667 aa22.04■■□□□ 1.12
COLCA2-207ENST00000639470 RSPH6AQ9H0K4 717 aa22.04■■□□□ 1.12
COLCA2-207ENST00000639470 KCPQ6ZWJ8 1503 aa22.04■■□□□ 1.12
COLCA2-207ENST00000639470 ZNF831Q5JPB2 1677 aa22.03■■□□□ 1.12
COLCA2-207ENST00000639470 ADAMTS7Q9UKP4 1686 aa22.03■■□□□ 1.12
COLCA2-207ENST00000639470 GYS1P13807 737 aa22.02■■□□□ 1.12
COLCA2-207ENST00000639470 ZNF784Q8NCA9 323 aaPredicted RBP22.02■■□□□ 1.12
COLCA2-207ENST00000639470 CD2APQ9Y5K6 639 aa22.02■■□□□ 1.12
COLCA2-207ENST00000639470 HMGB2P26583 209 aaKnown RBP22■■□□□ 1.11
COLCA2-207ENST00000639470 RFC4P35249 363 aa22■■□□□ 1.11
COLCA2-207ENST00000639470 CICQ96RK0 1608 aaPredicted RBP21.99■■□□□ 1.11
COLCA2-207ENST00000639470 U2AF1L5P0DN76 240 aaPredicted RBP21.99■■□□□ 1.11
COLCA2-207ENST00000639470 U2AF1Q01081 240 aaKnown RBP eCLIP21.99■■□□□ 1.11
COLCA2-207ENST00000639470 CFAP53Q96M91 514 aa21.99■■□□□ 1.11
COLCA2-207ENST00000639470 C4AP0C0L4 1744 aa21.99■■□□□ 1.11
COLCA2-207ENST00000639470 GNAT3A8MTJ3 354 aa21.98■■□□□ 1.11
COLCA2-207ENST00000639470 KCNQ3O43525 872 aa21.98■■□□□ 1.11
COLCA2-207ENST00000639470 CYP19A1P11511 503 aaPredicted RBP21.98■■□□□ 1.11
COLCA2-207ENST00000639470 FKBP8Q14318 412 aa21.98■■□□□ 1.11
COLCA2-207ENST00000639470 ZBTB1Q9Y2K1 713 aa21.98■■□□□ 1.11
COLCA2-207ENST00000639470 ADRA2BP18089 450 aa21.97■■□□□ 1.11
COLCA2-207ENST00000639470 GAS2L2Q8NHY3 880 aa21.97■■□□□ 1.11
COLCA2-207ENST00000639470 CCDC87Q9NVE4 849 aa21.97■■□□□ 1.11
COLCA2-207ENST00000639470 GOLGB1Q14789 3259 aaKnown RBP21.97■■□□□ 1.11
COLCA2-207ENST00000639470 USP42Q9H9J4 1324 aaKnown RBP21.96■■□□□ 1.11
COLCA2-207ENST00000639470 VIRMAQ69YN4 1812 aaKnown RBP21.96■■□□□ 1.11
COLCA2-207ENST00000639470 DDR1Q08345 913 aa21.95■■□□□ 1.1
COLCA2-207ENST00000639470 DCTN1Q14203 1278 aa21.95■■□□□ 1.1
COLCA2-207ENST00000639470 ZNF496Q96IT1 587 aaPredicted RBP21.95■■□□□ 1.1
COLCA2-207ENST00000639470 SOS1Q07889 1333 aaPredicted RBP21.95■■□□□ 1.1
COLCA2-207ENST00000639470 PXDNLA1KZ92 1463 aa21.95■■□□□ 1.1
COLCA2-207ENST00000639470 MCM10Q7L590 875 aa21.94■■□□□ 1.1
COLCA2-207ENST00000639470 NLGN1Q8N2Q7 840 aa21.94■■□□□ 1.1
COLCA2-207ENST00000639470 TEFQ10587 303 aa21.93■■□□□ 1.1
COLCA2-207ENST00000639470 USPL1Q5W0Q7 1092 aa21.93■■□□□ 1.1
COLCA2-207ENST00000639470 C10orf71Q711Q0 1435 aa21.93■■□□□ 1.1
COLCA2-207ENST00000639470 CEMIPQ8WUJ3 1361 aa21.92■■□□□ 1.1
COLCA2-207ENST00000639470 A0A0G2JLW4 131 aa21.92■■□□□ 1.1
COLCA2-207ENST00000639470 CANXP27824 592 aaKnown RBP21.92■■□□□ 1.1
COLCA2-207ENST00000639470 NUDCQ9Y266 331 aa21.92■■□□□ 1.1
COLCA2-207ENST00000639470 ZNF790Q6PG37 636 aa21.91■■□□□ 1.1
COLCA2-207ENST00000639470 KIAA1551Q9HCM1 1747 aa21.91■■□□□ 1.1
COLCA2-207ENST00000639470 UBR2Q8IWV8 1755 aa21.9■■□□□ 1.1
COLCA2-207ENST00000639470 PRAMEF22A3QJZ6 481 aa21.9■■□□□ 1.1
COLCA2-207ENST00000639470 TTC5Q8N0Z6 440 aa21.9■■□□□ 1.1
COLCA2-207ENST00000639470 BCL2L12Q9HB09 334 aa21.9■■□□□ 1.1
COLCA2-207ENST00000639470 COL15A1P39059 1388 aa21.89■■□□□ 1.1
COLCA2-207ENST00000639470 DPEP1P16444 411 aa21.89■■□□□ 1.09
COLCA2-207ENST00000639470 PIP4K2AP48426 406 aaPredicted RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms