RNA–Protein interactions for RNA: ENST00000639054.1

PAX6-250, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-250ENST00000639054 SLC52A2Q9HAB3 445 aa15.22■□□□□ 0.03
PAX6-250ENST00000639054 SLC39A6Q13433 755 aa15.21■□□□□ 0.03
PAX6-250ENST00000639054 DDB1Q16531 1140 aa15.21■□□□□ 0.03
PAX6-250ENST00000639054 BARGINQ6ZT62 677 aa15.21■□□□□ 0.03
PAX6-250ENST00000639054 SIPA1L3O60292 1781 aaPredicted RBP15.21■□□□□ 0.03
PAX6-250ENST00000639054 HSP90AB1P08238 724 aaKnown RBP15.2■□□□□ 0.02
PAX6-250ENST00000639054 SSH1Q8WYL5 1049 aa15.2■□□□□ 0.02
PAX6-250ENST00000639054 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.2■□□□□ 0.02
PAX6-250ENST00000639054 NKX1-1Q15270 411 aaPredicted RBP15.2■□□□□ 0.02
PAX6-250ENST00000639054 A0A0G2JS52 829 aa15.19■□□□□ 0.02
PAX6-250ENST00000639054 CABP4P57796 275 aa15.19■□□□□ 0.02
PAX6-250ENST00000639054 MYT1Q01538 1121 aa15.19■□□□□ 0.02
PAX6-250ENST00000639054 TNS2Q63HR2 1409 aa15.19■□□□□ 0.02
PAX6-250ENST00000639054 NEFLP07196 543 aa15.19■□□□□ 0.02
PAX6-250ENST00000639054 C20orf194Q5TEA3 1177 aa15.19■□□□□ 0.02
PAX6-250ENST00000639054 GJD4Q96KN9 370 aaPredicted RBP15.19■□□□□ 0.02
PAX6-250ENST00000639054 CDCA7Q9BWT1 371 aaPredicted RBP15.19■□□□□ 0.02
PAX6-250ENST00000639054 QTRT2Q9H974 415 aaKnown RBP15.19■□□□□ 0.02
PAX6-250ENST00000639054 GLI3P10071 1580 aa15.19■□□□□ 0.02
PAX6-250ENST00000639054 KDM3BQ7LBC6 1761 aa15.18■□□□□ 0.02
PAX6-250ENST00000639054 MARCH10Q8NA82 808 aaPredicted RBP15.18■□□□□ 0.02
PAX6-250ENST00000639054 TOGARAM1Q9Y4F4 1720 aa15.18■□□□□ 0.02
PAX6-250ENST00000639054 CT47B1P0C2W7 299 aaPredicted RBP15.18■□□□□ 0.02
PAX6-250ENST00000639054 EIF4A1P60842 406 aaKnown RBP15.18■□□□□ 0.02
PAX6-250ENST00000639054 NECTIN2Q92692 538 aa15.18■□□□□ 0.02
PAX6-250ENST00000639054 FRAT1Q92837 279 aaPredicted RBP15.18■□□□□ 0.02
PAX6-250ENST00000639054 SMC4Q9NTJ3 1288 aa15.18■□□□□ 0.02
PAX6-250ENST00000639054 TNNQ9UQP3 1299 aa15.18■□□□□ 0.02
PAX6-250ENST00000639054 KAT6BQ8WYB5 2073 aa15.18■□□□□ 0.02
PAX6-250ENST00000639054 BABAM1Q9NWV8 329 aa15.17■□□□□ 0.02
PAX6-250ENST00000639054 TRPC5Q9UL62 973 aaPredicted RBP15.17■□□□□ 0.02
PAX6-250ENST00000639054 ATRNO75882 1429 aa15.17■□□□□ 0.02
PAX6-250ENST00000639054 PRAMEF22A3QJZ6 481 aa15.16■□□□□ 0.02
PAX6-250ENST00000639054 MRC1P22897 1456 aa15.16■□□□□ 0.02
PAX6-250ENST00000639054 ERVV-2B6SEH9 535 aa15.15■□□□□ 0.02
PAX6-250ENST00000639054 FAM182BQ5T319 152 aa15.15■□□□□ 0.02
PAX6-250ENST00000639054 ZNF790Q6PG37 636 aa15.15■□□□□ 0.02
PAX6-250ENST00000639054 ACSBG1Q96GR2 724 aa15.14■□□□□ 0.01
PAX6-250ENST00000639054 MRPL50Q8N5N7 158 aaKnown RBP15.14■□□□□ 0.01
PAX6-250ENST00000639054 SYTL4Q96C24 671 aaPredicted RBP15.14■□□□□ 0.01
PAX6-250ENST00000639054 NOB1Q9ULX3 412 aaKnown RBP15.14■□□□□ 0.01
PAX6-250ENST00000639054 CANXP27824 592 aaKnown RBP15.13■□□□□ 0.01
PAX6-250ENST00000639054 ALDH1L2Q3SY69 923 aa15.13■□□□□ 0.01
PAX6-250ENST00000639054 PIGBQ92521 554 aa15.13■□□□□ 0.01
PAX6-250ENST00000639054 ITGB4P16144 1822 aa15.13■□□□□ 0.01
PAX6-250ENST00000639054 EIF2S2P20042 333 aaKnown RBP15.13■□□□□ 0.01
PAX6-250ENST00000639054 PRIM1P49642 420 aaKnown RBP15.13■□□□□ 0.01
PAX6-250ENST00000639054 ZNF496Q96IT1 587 aaPredicted RBP15.13■□□□□ 0.01
PAX6-250ENST00000639054 TMOD3Q9NYL9 352 aa15.13■□□□□ 0.01
PAX6-250ENST00000639054 THSD7AQ9UPZ6 1657 aa15.12■□□□□ 0.01
PAX6-250ENST00000639054 CLUAP1Q96AJ1 413 aa15.12■□□□□ 0.01
PAX6-250ENST00000639054 EXOC6Q8TAG9 804 aa15.12■□□□□ 0.01
PAX6-250ENST00000639054 PANK1Q8TE04 598 aa15.12■□□□□ 0.01
PAX6-250ENST00000639054 ASAP1Q9ULH1 1129 aa15.12■□□□□ 0.01
PAX6-250ENST00000639054 DOT1LQ8TEK3 1739 aa15.11■□□□□ 0.01
PAX6-250ENST00000639054 GIGYF1O75420 1035 aaPredicted RBP15.11■□□□□ 0.01
PAX6-250ENST00000639054 SEPT12Q8IYM1 358 aa15.11■□□□□ 0.01
PAX6-250ENST00000639054 TTC5Q8N0Z6 440 aa15.11■□□□□ 0.01
PAX6-250ENST00000639054 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.11■□□□□ 0.01
PAX6-250ENST00000639054 PTCD1O75127 700 aaKnown RBP15.1■□□□□ 0.01
PAX6-250ENST00000639054 ZNF428Q96B54 188 aa15.1■□□□□ 0.01
PAX6-250ENST00000639054 CRBNQ96SW2 442 aa15.1■□□□□ 0.01
PAX6-250ENST00000639054 HEG1Q9ULI3 1381 aa15.1■□□□□ 0.01
PAX6-250ENST00000639054 KCNQ2O43526 872 aa15.1■□□□□ 0.01
PAX6-250ENST00000639054 ONECUT3O60422 494 aaPredicted RBP15.1■□□□□ 0.01
PAX6-250ENST00000639054 SLC4A2P04920 1241 aa15.1■□□□□ 0.01
PAX6-250ENST00000639054 RLBP1P12271 317 aa15.1■□□□□ 0.01
PAX6-250ENST00000639054 G2E3Q7L622 706 aa15.1■□□□□ 0.01
PAX6-250ENST00000639054 HDGFL1Q5TGJ6 251 aa15.09■□□□□ 0.01
PAX6-250ENST00000639054 ANXA1P04083 346 aa15.09■□□□□ 0.01
PAX6-250ENST00000639054 TRIM27P14373 513 aa15.09■□□□□ 0.01
PAX6-250ENST00000639054 C5P01031 1676 aa15.08■□□□□ 0.01
PAX6-250ENST00000639054 EP400Q96L91 3159 aa15.08■□□□□ 0.01
PAX6-250ENST00000639054 ZKSCAN2Q63HK3 967 aa15.08■□□□□ 0
PAX6-250ENST00000639054 PTF1AQ7RTS3 328 aa15.08■□□□□ 0
PAX6-250ENST00000639054 ATG3Q9NT62 314 aa15.08■□□□□ 0
PAX6-250ENST00000639054 RGS17Q9UGC6 210 aaPredicted RBP15.08■□□□□ 0
PAX6-250ENST00000639054 BCL9O00512 1426 aa15.08■□□□□ 0
PAX6-250ENST00000639054 CCDC30Q5VVM6 783 aa15.08■□□□□ 0
PAX6-250ENST00000639054 ZNF772Q68DY9 489 aaPredicted RBP15.08■□□□□ 0
PAX6-250ENST00000639054 FMNL2Q96PY5 1086 aa15.08■□□□□ 0
PAX6-250ENST00000639054 USP16Q9Y5T5 823 aa15.08■□□□□ 0
PAX6-250ENST00000639054 BRPF1P55201 1214 aaPredicted RBP15.07■□□□□ 0
PAX6-250ENST00000639054 COG6Q9Y2V7 657 aa15.07■□□□□ 0
PAX6-250ENST00000639054 PAPPAQ13219 1627 aa15.07■□□□□ 0
PAX6-250ENST00000639054 ATF7IPQ6VMQ6 1270 aa15.06■□□□□ 0
PAX6-250ENST00000639054 CHPF2Q9P2E5 772 aa15.06■□□□□ 0
PAX6-250ENST00000639054 KCPQ6ZWJ8 1503 aa15.06■□□□□ 0
PAX6-250ENST00000639054 KIF16BQ96L93 1317 aa15.06■□□□□ 0
PAX6-250ENST00000639054 PIP4K2AP48426 406 aaPredicted RBP15.06■□□□□ 0
PAX6-250ENST00000639054 PROSER3Q2NL68 480 aa15.06■□□□□ 0
PAX6-250ENST00000639054 STK31Q9BXU1 1019 aa15.06■□□□□ 0
PAX6-250ENST00000639054 UBR2Q8IWV8 1755 aa15.06■□□□□ 0
PAX6-250ENST00000639054 HOXB7P09629 217 aa15.05■□□□□ 0
PAX6-250ENST00000639054 RBM42Q9BTD8 480 aaKnown RBP15.05■□□□□ 0
PAX6-250ENST00000639054 PHAXQ9H814 394 aaKnown RBP15.05■□□□□ 0
PAX6-250ENST00000639054 SNRPA1P09661 255 aaKnown RBP15.05■□□□□ -0
PAX6-250ENST00000639054 BRWD3Q6RI45 1802 aa15.04■□□□□ -0
PAX6-250ENST00000639054 RBM6P78332 1123 aaKnown RBP15.04■□□□□ -0
PAX6-250ENST00000639054 PDE3AQ14432 1141 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms