RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 SLC4A9Q96Q91 983 aa11.25□□□□□ -0.61
FAM49B-230ENST00000639004 CAPN5O15484 640 aaPredicted RBP11.24□□□□□ -0.61
FAM49B-230ENST00000639004 PRMT3O60678 531 aa11.24□□□□□ -0.61
FAM49B-230ENST00000639004 ATP2B4P23634 1241 aa11.24□□□□□ -0.61
FAM49B-230ENST00000639004 EPHA4P54764 986 aa11.24□□□□□ -0.61
FAM49B-230ENST00000639004 CLN3Q13286 438 aa11.24□□□□□ -0.61
FAM49B-230ENST00000639004 OCLNQ16625 522 aa11.24□□□□□ -0.61
FAM49B-230ENST00000639004 B4GALNT3Q6L9W6 998 aa11.24□□□□□ -0.61
FAM49B-230ENST00000639004 TNS4Q8IZW8 715 aa11.24□□□□□ -0.61
FAM49B-230ENST00000639004 CNKSR1Q969H4 720 aa11.24□□□□□ -0.61
FAM49B-230ENST00000639004 HRH3Q9Y5N1 445 aa11.24□□□□□ -0.61
FAM49B-230ENST00000639004 AVPP01185 164 aa11.23□□□□□ -0.61
FAM49B-230ENST00000639004 KCNA1Q09470 495 aa11.23□□□□□ -0.61
FAM49B-230ENST00000639004 PRIMPOLQ96LW4 560 aa11.23□□□□□ -0.61
FAM49B-230ENST00000639004 ESYT1Q9BSJ8 1104 aa11.23□□□□□ -0.61
FAM49B-230ENST00000639004 ZNF395Q9H8N7 513 aaPredicted RBP11.22□□□□□ -0.61
FAM49B-230ENST00000639004 WEE1P30291 646 aa11.21□□□□□ -0.61
FAM49B-230ENST00000639004 SMTNP53814 917 aa11.21□□□□□ -0.61
FAM49B-230ENST00000639004 MTFR1Q15390 333 aa11.21□□□□□ -0.61
FAM49B-230ENST00000639004 CXXC1Q9P0U4 656 aaPredicted RBP11.21□□□□□ -0.61
FAM49B-230ENST00000639004 ZBTB7CA1YPR0 619 aa11.2□□□□□ -0.62
FAM49B-230ENST00000639004 A6NJY4 79 aa11.2□□□□□ -0.62
FAM49B-230ENST00000639004 MEN1O00255 615 aa11.2□□□□□ -0.62
FAM49B-230ENST00000639004 NRG2O14511 850 aaPredicted RBP11.2□□□□□ -0.62
FAM49B-230ENST00000639004 GFRA3O60609 400 aa11.2□□□□□ -0.62
FAM49B-230ENST00000639004 TSEN34Q9BSV6 310 aaKnown RBP11.2□□□□□ -0.62
FAM49B-230ENST00000639004 FOXK2Q01167 660 aa11.19□□□□□ -0.62
FAM49B-230ENST00000639004 TLR1Q15399 786 aa11.19□□□□□ -0.62
FAM49B-230ENST00000639004 LINC00528Q8N1L1 170 aa11.19□□□□□ -0.62
FAM49B-230ENST00000639004 FHDC1Q9C0D6 1143 aaPredicted RBP11.19□□□□□ -0.62
FAM49B-230ENST00000639004 TSPAN10Q9H1Z9 355 aaPredicted RBP11.19□□□□□ -0.62
FAM49B-230ENST00000639004 SCHIP1Q9P0W5 487 aaPredicted RBP11.19□□□□□ -0.62
FAM49B-230ENST00000639004 PATL2C9JE40 543 aaKnown RBP11.18□□□□□ -0.62
FAM49B-230ENST00000639004 DGAT1O75907 488 aa11.18□□□□□ -0.62
FAM49B-230ENST00000639004 CENPCQ03188 943 aa11.18□□□□□ -0.62
FAM49B-230ENST00000639004 C1orf216Q8TAB5 229 aa11.18□□□□□ -0.62
FAM49B-230ENST00000639004 NLRP3Q96P20 1036 aa11.18□□□□□ -0.62
FAM49B-230ENST00000639004 SPINT1O43278 529 aa11.17□□□□□ -0.62
FAM49B-230ENST00000639004 C21orf2O43822 256 aa11.17□□□□□ -0.62
FAM49B-230ENST00000639004 IGFBP4P22692 258 aa11.17□□□□□ -0.62
FAM49B-230ENST00000639004 PKDCCQ504Y2 493 aa11.17□□□□□ -0.62
FAM49B-230ENST00000639004 GAS2L2Q8NHY3 880 aa11.17□□□□□ -0.62
FAM49B-230ENST00000639004 SCG3Q8WXD2 468 aaKnown RBP11.17□□□□□ -0.62
FAM49B-230ENST00000639004 IQSEC3Q9UPP2 1182 aaPredicted RBP11.17□□□□□ -0.62
FAM49B-230ENST00000639004 USP3Q9Y6I4 520 aa11.17□□□□□ -0.62
FAM49B-230ENST00000639004 ATAD2Q6PL18 1390 aa11.16□□□□□ -0.62
FAM49B-230ENST00000639004 SCNN1AP37088 669 aa11.16□□□□□ -0.62
FAM49B-230ENST00000639004 TBCELQ5QJ74 424 aa11.16□□□□□ -0.62
FAM49B-230ENST00000639004 TXNDC2Q86VQ3 553 aa11.16□□□□□ -0.62
FAM49B-230ENST00000639004 SLC9A9Q8IVB4 645 aa11.16□□□□□ -0.62
FAM49B-230ENST00000639004 PURBQ96QR8 312 aaKnown RBP11.16□□□□□ -0.62
FAM49B-230ENST00000639004 INSM2Q96T92 566 aaPredicted RBP11.16□□□□□ -0.62
FAM49B-230ENST00000639004 IRX2Q9BZI1 471 aaPredicted RBP11.16□□□□□ -0.62
FAM49B-230ENST00000639004 CDK2AP1O14519 115 aa11.15□□□□□ -0.62
FAM49B-230ENST00000639004 UPP2O95045 317 aa11.15□□□□□ -0.62
FAM49B-230ENST00000639004 SMCPP49901 116 aaPredicted RBP11.15□□□□□ -0.62
FAM49B-230ENST00000639004 FKBP5Q13451 457 aaPredicted RBP11.15□□□□□ -0.62
FAM49B-230ENST00000639004 CTC1Q2NKJ3 1217 aa11.15□□□□□ -0.62
FAM49B-230ENST00000639004 MRPL14Q6P1L8 145 aaKnown RBP11.15□□□□□ -0.62
FAM49B-230ENST00000639004 TAS1R3Q7RTX0 852 aa11.15□□□□□ -0.62
FAM49B-230ENST00000639004 IVNS1ABPQ9Y6Y0 642 aa11.15□□□□□ -0.62
FAM49B-230ENST00000639004 GNEQ9Y223 722 aaKnown RBP11.14□□□□□ -0.63
FAM49B-230ENST00000639004 FOXO3O43524 673 aa11.13□□□□□ -0.63
FAM49B-230ENST00000639004 BMP2P12643 396 aa11.13□□□□□ -0.63
FAM49B-230ENST00000639004 GPC1P35052 558 aa11.13□□□□□ -0.63
FAM49B-230ENST00000639004 C6orf118Q5T5N4 469 aa11.13□□□□□ -0.63
FAM49B-230ENST00000639004 FOXD4L5Q5VV16 416 aaPredicted RBP11.13□□□□□ -0.63
FAM49B-230ENST00000639004 ZSCAN10Q96SZ4 725 aaPredicted RBP11.13□□□□□ -0.63
FAM49B-230ENST00000639004 PPP1R12BO60237 982 aaPredicted RBP11.12□□□□□ -0.63
FAM49B-230ENST00000639004 BMP1P13497 986 aa11.12□□□□□ -0.63
FAM49B-230ENST00000639004 ARID4AP29374 1257 aaPredicted RBP11.12□□□□□ -0.63
FAM49B-230ENST00000639004 CTSOP43234 321 aaPredicted RBP11.12□□□□□ -0.63
FAM49B-230ENST00000639004 RNF144AP50876 292 aaPredicted RBP11.12□□□□□ -0.63
FAM49B-230ENST00000639004 ZNF295-AS1Q8N0V1 137 aa11.12□□□□□ -0.63
FAM49B-230ENST00000639004 CRIPAKQ8N1N5 446 aa11.12□□□□□ -0.63
FAM49B-230ENST00000639004 NBPF15Q8N660 670 aa11.12□□□□□ -0.63
FAM49B-230ENST00000639004 MKNK1Q9BUB5 465 aa11.12□□□□□ -0.63
FAM49B-230ENST00000639004 GRIP2Q9C0E4 1043 aa11.12□□□□□ -0.63
FAM49B-230ENST00000639004 POLMQ9NP87 494 aaPredicted RBP11.12□□□□□ -0.63
FAM49B-230ENST00000639004 LAPTM4AQ15012 233 aa11.11□□□□□ -0.63
FAM49B-230ENST00000639004 TRIM46Q7Z4K8 759 aa11.11□□□□□ -0.63
FAM49B-230ENST00000639004 PPARGC1BQ86YN6 1023 aaKnown RBP11.11□□□□□ -0.63
FAM49B-230ENST00000639004 CHMP7Q8WUX9 453 aaPredicted RBP11.11□□□□□ -0.63
FAM49B-230ENST00000639004 AXIN1O15169 862 aa11.1□□□□□ -0.63
FAM49B-230ENST00000639004 PSMA6P60900 246 aaKnown RBP11.1□□□□□ -0.63
FAM49B-230ENST00000639004 CAPN12Q6ZSI9 719 aa11.1□□□□□ -0.63
FAM49B-230ENST00000639004 STAG2Q8N3U4 1231 aa11.1□□□□□ -0.63
FAM49B-230ENST00000639004 CCER1Q8TC90 406 aaPredicted RBP11.1□□□□□ -0.63
FAM49B-230ENST00000639004 SLC27A3Q5K4L6 730 aa11.09□□□□□ -0.63
FAM49B-230ENST00000639004 TMEM214Q6NUQ4 689 aaKnown RBP11.09□□□□□ -0.63
FAM49B-230ENST00000639004 ZDHHC1Q8WTX9 485 aa11.09□□□□□ -0.63
FAM49B-230ENST00000639004 COL26A1Q96A83 441 aa11.09□□□□□ -0.63
FAM49B-230ENST00000639004 C2orf49Q9BVC5 232 aaPredicted RBP11.09□□□□□ -0.63
FAM49B-230ENST00000639004 SCARF1Q14162 830 aa11.08□□□□□ -0.64
FAM49B-230ENST00000639004 TEAD4Q15561 434 aa11.08□□□□□ -0.64
FAM49B-230ENST00000639004 POTEAQ6S8J7 498 aa11.08□□□□□ -0.64
FAM49B-230ENST00000639004 RNF217Q8TC41 542 aa11.08□□□□□ -0.64
FAM49B-230ENST00000639004 RHBDD1Q8TEB9 315 aa11.08□□□□□ -0.64
FAM49B-230ENST00000639004 GZF1Q9H116 711 aaPredicted RBP11.08□□□□□ -0.64
FAM49B-230ENST00000639004 PODXL2Q9NZ53 605 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms