RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 NUP133Q8WUM0 1156 aa20.16■□□□□ 0.82
HNRNPU-217ENST00000638952 ZMYND15Q9H091 742 aa20.16■□□□□ 0.82
HNRNPU-217ENST00000638952 TANGO6Q9C0B7 1094 aa20.16■□□□□ 0.82
HNRNPU-217ENST00000638952 NF2P35240 595 aa20.15■□□□□ 0.82
HNRNPU-217ENST00000638952 POLR3GO15318 223 aaPredicted RBP20.15■□□□□ 0.82
HNRNPU-217ENST00000638952 PRPF40BQ6NWY9 871 aaKnown RBP20.15■□□□□ 0.82
HNRNPU-217ENST00000638952 FERMT3Q86UX7 667 aa20.15■□□□□ 0.82
HNRNPU-217ENST00000638952 IGHDP01880 384 aa20.15■□□□□ 0.82
HNRNPU-217ENST00000638952 GNAT3A8MTJ3 354 aa20.14■□□□□ 0.82
HNRNPU-217ENST00000638952 GTF2F1P35269 517 aaKnown RBP eCLIP20.14■□□□□ 0.829e-8■■■□□ 18.9
HNRNPU-217ENST00000638952 KRT32Q14532 448 aa20.14■□□□□ 0.82
HNRNPU-217ENST00000638952 STIM1Q13586 685 aa20.14■□□□□ 0.81
HNRNPU-217ENST00000638952 PAF1Q8N7H5 531 aa20.14■□□□□ 0.81
HNRNPU-217ENST00000638952 CCDC148Q8NFR7 591 aa20.14■□□□□ 0.81
HNRNPU-217ENST00000638952 IKQ13123 557 aaPredicted RBP20.14■□□□□ 0.81
HNRNPU-217ENST00000638952 TRIM27P14373 513 aa20.13■□□□□ 0.81
HNRNPU-217ENST00000638952 RNF187Q5TA31 235 aaPredicted RBP20.13■□□□□ 0.81
HNRNPU-217ENST00000638952 PTPN14Q15678 1187 aa20.13■□□□□ 0.81
HNRNPU-217ENST00000638952 ABCC11Q96J66 1382 aa20.13■□□□□ 0.81
HNRNPU-217ENST00000638952 NACAP1Q9BZK3 213 aa20.13■□□□□ 0.81
HNRNPU-217ENST00000638952 ARHGAP29Q52LW3 1261 aa20.13■□□□□ 0.81
HNRNPU-217ENST00000638952 STRN4Q9NRL3 753 aa20.13■□□□□ 0.81
HNRNPU-217ENST00000638952 RPRD2Q5VT52 1461 aaKnown RBP20.13■□□□□ 0.81
HNRNPU-217ENST00000638952 CCDC57Q2TAC2 916 aa20.13■□□□□ 0.81
HNRNPU-217ENST00000638952 CCDC183Q5T5S1 534 aa20.13■□□□□ 0.81
HNRNPU-217ENST00000638952 MAGI1Q96QZ7 1491 aaPredicted RBP20.13■□□□□ 0.81
HNRNPU-217ENST00000638952 KIF2AO00139 706 aaPredicted RBP20.12■□□□□ 0.81
HNRNPU-217ENST00000638952 EPB41L2O43491 1005 aaKnown RBP20.12■□□□□ 0.81
HNRNPU-217ENST00000638952 NUDT16Q96DE0 195 aaKnown RBP20.12■□□□□ 0.81
HNRNPU-217ENST00000638952 FAM107BQ9H098 131 aa20.12■□□□□ 0.81
HNRNPU-217ENST00000638952 DISP3Q9P2K9 1392 aa20.12■□□□□ 0.81
HNRNPU-217ENST00000638952 SPG7Q9UQ90 795 aa20.12■□□□□ 0.81
HNRNPU-217ENST00000638952 KIF1BPQ96EK5 621 aa20.12■□□□□ 0.81
HNRNPU-217ENST00000638952 ZSCAN25Q6NSZ9 544 aa20.11■□□□□ 0.81
HNRNPU-217ENST00000638952 KIAA1328Q86T90 577 aa20.11■□□□□ 0.81
HNRNPU-217ENST00000638952 CDKL5O76039 1030 aa20.11■□□□□ 0.81
HNRNPU-217ENST00000638952 XPCQ01831 940 aaPredicted RBP20.11■□□□□ 0.81
HNRNPU-217ENST00000638952 MICALCLQ6ZW33 695 aa20.11■□□□□ 0.81
HNRNPU-217ENST00000638952 GNL3LQ9NVN8 582 aaKnown RBP20.11■□□□□ 0.81
HNRNPU-217ENST00000638952 RAB11FIP3O75154 756 aa20.11■□□□□ 0.81
HNRNPU-217ENST00000638952 RAPGEF3O95398 923 aa20.11■□□□□ 0.81
HNRNPU-217ENST00000638952 TAF4BQ92750 862 aa20.11■□□□□ 0.81
HNRNPU-217ENST00000638952 TNNT1P13805 278 aa20.1■□□□□ 0.81
HNRNPU-217ENST00000638952 DDX54Q8TDD1 881 aaKnown RBP20.1■□□□□ 0.81
HNRNPU-217ENST00000638952 ABCA10Q8WWZ4 1543 aa20.1■□□□□ 0.81
HNRNPU-217ENST00000638952 FAM135AQ9P2D6 1515 aa20.1■□□□□ 0.81
HNRNPU-217ENST00000638952 CUL7Q14999 1698 aa20.1■□□□□ 0.81
HNRNPU-217ENST00000638952 KIAA0586Q9BVV6 1533 aa20.1■□□□□ 0.81
HNRNPU-217ENST00000638952 CC2D2AQ9P2K1 1620 aa20.1■□□□□ 0.81
HNRNPU-217ENST00000638952 CCDC91Q7Z6B0 441 aa20.09■□□□□ 0.81
HNRNPU-217ENST00000638952 SPINK5Q9NQ38 1064 aaPredicted RBP20.09■□□□□ 0.81
HNRNPU-217ENST00000638952 CTNNA3Q9UI47 895 aa20.09■□□□□ 0.81
HNRNPU-217ENST00000638952 KIF14Q15058 1648 aa20.09■□□□□ 0.81
HNRNPU-217ENST00000638952 SMTNL1A8MU46 457 aa20.09■□□□□ 0.81
HNRNPU-217ENST00000638952 PROSER2Q86WR7 435 aaPredicted RBP20.09■□□□□ 0.81
HNRNPU-217ENST00000638952 F6X3S4 739 aa20.09■□□□□ 0.81
HNRNPU-217ENST00000638952 MAP9Q49MG5 647 aa20.09■□□□□ 0.81
HNRNPU-217ENST00000638952 PPP4R3BQ5MIZ7 849 aa20.09■□□□□ 0.81
HNRNPU-217ENST00000638952 TMEM132AQ24JP5 1023 aa20.09■□□□□ 0.81
HNRNPU-217ENST00000638952 WAPLQ7Z5K2 1190 aa20.09■□□□□ 0.81
HNRNPU-217ENST00000638952 CCDC113Q9H0I3 377 aa20.09■□□□□ 0.81
HNRNPU-217ENST00000638952 TBC1D9Q6ZT07 1266 aa20.08■□□□□ 0.81
HNRNPU-217ENST00000638952 KIF18AQ8NI77 898 aa20.08■□□□□ 0.81
HNRNPU-217ENST00000638952 NOL7Q9UMY1 257 aaKnown RBP20.08■□□□□ 0.8
HNRNPU-217ENST00000638952 GLRX3O76003 335 aaKnown RBP20.08■□□□□ 0.8
HNRNPU-217ENST00000638952 PLEKHH1Q9ULM0 1364 aa20.07■□□□□ 0.8
HNRNPU-217ENST00000638952 SEPT11Q9NVA2 429 aaKnown RBP20.07■□□□□ 0.8
HNRNPU-217ENST00000638952 CASQ1P31415 396 aa20.07■□□□□ 0.8
HNRNPU-217ENST00000638952 NME9Q86XW9 330 aa20.07■□□□□ 0.8
HNRNPU-217ENST00000638952 TBC1D32Q96NH3 1257 aa20.07■□□□□ 0.8
HNRNPU-217ENST00000638952 EMILIN1Q9Y6C2 1016 aa20.07■□□□□ 0.8
HNRNPU-217ENST00000638952 PDIA4P13667 645 aaKnown RBP20.06■□□□□ 0.8
HNRNPU-217ENST00000638952 JAKMIP3Q5VZ66 844 aa20.06■□□□□ 0.8
HNRNPU-217ENST00000638952 ADGRF5Q8IZF2 1346 aa20.06■□□□□ 0.8
HNRNPU-217ENST00000638952 CEP63Q96MT8 703 aa20.06■□□□□ 0.8
HNRNPU-217ENST00000638952 URI1O94763 535 aaPredicted RBP20.06■□□□□ 0.8
HNRNPU-217ENST00000638952 CEP126Q9P2H0 1117 aa20.06■□□□□ 0.8
HNRNPU-217ENST00000638952 TDO2P48775 406 aa20.05■□□□□ 0.8
HNRNPU-217ENST00000638952 IMMTQ16891 758 aaKnown RBP20.05■□□□□ 0.8
HNRNPU-217ENST00000638952 BOLA2Q9H3K6 86 aa20.05■□□□□ 0.8
HNRNPU-217ENST00000638952 MAPKBP1O60336 1514 aa20.05■□□□□ 0.8
HNRNPU-217ENST00000638952 ZSCAN12O43309 604 aa20.05■□□□□ 0.8
HNRNPU-217ENST00000638952 GTF2A1P52655 376 aaPredicted RBP20.05■□□□□ 0.8
HNRNPU-217ENST00000638952 TOM1L2Q6ZVM7 507 aa20.05■□□□□ 0.8
HNRNPU-217ENST00000638952 CFAP100Q494V2 611 aa20.05■□□□□ 0.8
HNRNPU-217ENST00000638952 LARP6Q9BRS8 491 aaKnown RBP20.05■□□□□ 0.8
HNRNPU-217ENST00000638952 PLB1Q6P1J6 1458 aa20.05■□□□□ 0.8
HNRNPU-217ENST00000638952 CCDC85AQ96PX6 553 aaPredicted RBP20.05■□□□□ 0.8
HNRNPU-217ENST00000638952 ZHX3Q9H4I2 956 aa20.05■□□□□ 0.8
HNRNPU-217ENST00000638952 USP25Q9UHP3 1055 aa20.05■□□□□ 0.8
HNRNPU-217ENST00000638952 SCAF11Q99590 1463 aaKnown RBP20.04■□□□□ 0.8
HNRNPU-217ENST00000638952 SPDYE4A6NLX3 237 aa20.04■□□□□ 0.8
HNRNPU-217ENST00000638952 SFPQP23246 707 aaKnown RBP eCLIP20.04■□□□□ 0.8
HNRNPU-217ENST00000638952 CCDC61Q9Y6R9 512 aa20.04■□□□□ 0.8
HNRNPU-217ENST00000638952 MCM3P25205 808 aa20.04■□□□□ 0.8
HNRNPU-217ENST00000638952 TIGD1Q96MW7 591 aa20.04■□□□□ 0.8
HNRNPU-217ENST00000638952 MPHOSPH8Q99549 860 aa20.04■□□□□ 0.8
HNRNPU-217ENST00000638952 GDPD2Q9HCC8 539 aa20.04■□□□□ 0.8
HNRNPU-217ENST00000638952 UBAC1Q9BSL1 405 aa20.03■□□□□ 0.8
HNRNPU-217ENST00000638952 SH2B1Q9NRF2 756 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms