RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 PCDHB15Q9Y5E8 787 aa12.63□□□□□ -0.39
ATM-226ENST00000638443 ZNF530Q6P9A1 599 aaPredicted RBP12.62□□□□□ -0.39
ATM-226ENST00000638443 NLRP2Q9NX02 1062 aa12.62□□□□□ -0.39
ATM-226ENST00000638443 MEGF6O75095 1541 aa12.62□□□□□ -0.39
ATM-226ENST00000638443 MPRIPQ6WCQ1 1025 aa12.62□□□□□ -0.39
ATM-226ENST00000638443 ZNF428Q96B54 188 aa12.62□□□□□ -0.39
ATM-226ENST00000638443 ECM2O94769 699 aaPredicted RBP12.61□□□□□ -0.39
ATM-226ENST00000638443 CSB-PGBD3P0DP91 1061 aa12.61□□□□□ -0.39
ATM-226ENST00000638443 RBM19Q9Y4C8 960 aaKnown RBP12.61□□□□□ -0.39
ATM-226ENST00000638443 LTBP4Q8N2S1 1624 aa12.61□□□□□ -0.39
ATM-226ENST00000638443 CEMIPQ8WUJ3 1361 aa12.61□□□□□ -0.39
ATM-226ENST00000638443 RGL2O15211 777 aa12.61□□□□□ -0.39
ATM-226ENST00000638443 ROBO1Q9Y6N7 1651 aa12.6□□□□□ -0.39
ATM-226ENST00000638443 CENPQQ7L2Z9 268 aaPredicted RBP12.6□□□□□ -0.39
ATM-226ENST00000638443 CPDO75976 1380 aa12.6□□□□□ -0.39
ATM-226ENST00000638443 HTATSF1O43719 755 aaKnown RBP12.59□□□□□ -0.39
ATM-226ENST00000638443 PRDM11Q9NQV5 511 aa12.59□□□□□ -0.39
ATM-226ENST00000638443 KCNQ3O43525 872 aa12.59□□□□□ -0.39
ATM-226ENST00000638443 RGS12O14924 1447 aa12.58□□□□□ -0.4
ATM-226ENST00000638443 PLEKHO1Q53GL0 409 aaPredicted RBP12.58□□□□□ -0.4
ATM-226ENST00000638443 AKAP4Q5JQC9 854 aa12.58□□□□□ -0.4
ATM-226ENST00000638443 KCTD17Q8N5Z5 321 aa12.58□□□□□ -0.4
ATM-226ENST00000638443 VIRMAQ69YN4 1812 aaKnown RBP12.57□□□□□ -0.4
ATM-226ENST00000638443 IPO8O15397 1037 aaKnown RBP12.57□□□□□ -0.4
ATM-226ENST00000638443 TAF7Q15545 349 aaPredicted RBP12.57□□□□□ -0.4
ATM-226ENST00000638443 G2E3Q7L622 706 aa12.57□□□□□ -0.4
ATM-226ENST00000638443 BCL11AQ9H165 835 aa12.57□□□□□ -0.4
ATM-226ENST00000638443 RAD21O60216 631 aa12.56□□□□□ -0.4
ATM-226ENST00000638443 C1orf141Q5JVX7 400 aa12.56□□□□□ -0.4
ATM-226ENST00000638443 RGS22Q8NE09 1264 aa12.56□□□□□ -0.4
ATM-226ENST00000638443 DDX19BQ9UMR2 479 aa12.56□□□□□ -0.4
ATM-226ENST00000638443 ABCC4O15439 1325 aa12.56□□□□□ -0.4
ATM-226ENST00000638443 COL5A2P05997 1499 aaPredicted RBP12.56□□□□□ -0.4
ATM-226ENST00000638443 ABCC6O95255 1503 aa12.56□□□□□ -0.4
ATM-226ENST00000638443 RNMTO43148 476 aaKnown RBP12.56□□□□□ -0.4
ATM-226ENST00000638443 RGS3P49796 1198 aa12.56□□□□□ -0.4
ATM-226ENST00000638443 AMOTQ4VCS5 1084 aa12.56□□□□□ -0.4
ATM-226ENST00000638443 RAPGEF4Q8WZA2 1011 aa12.56□□□□□ -0.4
ATM-226ENST00000638443 KDM3BQ7LBC6 1761 aa12.55□□□□□ -0.4
ATM-226ENST00000638443 KDM6AO15550 1401 aaPredicted RBP12.55□□□□□ -0.4
ATM-226ENST00000638443 MS4A1P11836 297 aa12.55□□□□□ -0.4
ATM-226ENST00000638443 STRN4Q9NRL3 753 aa12.55□□□□□ -0.4
ATM-226ENST00000638443 ZBTB40Q9NUA8 1239 aa12.55□□□□□ -0.4
ATM-226ENST00000638443 TEFQ10587 303 aa12.54□□□□□ -0.4
ATM-226ENST00000638443 ARHGAP45Q92619 1136 aa12.54□□□□□ -0.4
ATM-226ENST00000638443 F6X3S4 739 aa12.53□□□□□ -0.4
ATM-226ENST00000638443 TATP17735 454 aaPredicted RBP12.53□□□□□ -0.4
ATM-226ENST00000638443 TOM1L2Q6ZVM7 507 aa12.53□□□□□ -0.4
ATM-226ENST00000638443 WDR17Q8IZU2 1322 aa12.53□□□□□ -0.4
ATM-226ENST00000638443 BTBD11A6QL63 1104 aa12.53□□□□□ -0.4
ATM-226ENST00000638443 CYP27B1O15528 508 aa12.53□□□□□ -0.4
ATM-226ENST00000638443 EIF4A1P60842 406 aaKnown RBP12.53□□□□□ -0.4
ATM-226ENST00000638443 PDE4CQ08493 712 aa12.53□□□□□ -0.4
ATM-226ENST00000638443 LARP1Q6PKG0 1096 aaKnown RBP12.53□□□□□ -0.4
ATM-226ENST00000638443 ADAMTS7Q9UKP4 1686 aa12.52□□□□□ -0.4
ATM-226ENST00000638443 PRAMEF22A3QJZ6 481 aa12.52□□□□□ -0.4
ATM-226ENST00000638443 ZBTB7BO15156 539 aaPredicted RBP12.52□□□□□ -0.4
ATM-226ENST00000638443 PHKG2P15735 406 aa12.52□□□□□ -0.4
ATM-226ENST00000638443 API5Q9BZZ5 524 aaKnown RBP12.52□□□□□ -0.41
ATM-226ENST00000638443 USP35Q9P2H5 1018 aa12.52□□□□□ -0.41
ATM-226ENST00000638443 SIPA1L3O60292 1781 aaPredicted RBP12.52□□□□□ -0.41
ATM-226ENST00000638443 PKD1L3Q7Z443 1732 aa12.52□□□□□ -0.41
ATM-226ENST00000638443 AHDC1Q5TGY3 1603 aaPredicted RBP12.51□□□□□ -0.41
ATM-226ENST00000638443 ANXA1P04083 346 aa12.51□□□□□ -0.41
ATM-226ENST00000638443 EIF2S2P20042 333 aaKnown RBP12.51□□□□□ -0.41
ATM-226ENST00000638443 MTMR7Q9Y216 660 aa12.51□□□□□ -0.41
ATM-226ENST00000638443 SLC39A6Q13433 755 aa12.5□□□□□ -0.41
ATM-226ENST00000638443 HDGFL1Q5TGJ6 251 aa12.5□□□□□ -0.41
ATM-226ENST00000638443 OVOS2A0A0G2JMS6 1433 aa12.5□□□□□ -0.41
ATM-226ENST00000638443 COL16A1Q07092 1604 aaPredicted RBP12.5□□□□□ -0.41
ATM-226ENST00000638443 PIP4K2BP78356 416 aa12.5□□□□□ -0.41
ATM-226ENST00000638443 PHAXQ9H814 394 aaKnown RBP12.5□□□□□ -0.41
ATM-226ENST00000638443 SCN11AQ9UI33 1791 aa12.49□□□□□ -0.41
ATM-226ENST00000638443 FLIIQ13045 1269 aa12.49□□□□□ -0.41
ATM-226ENST00000638443 AAMPQ13685 434 aa12.49□□□□□ -0.41
ATM-226ENST00000638443 SLC4A10Q6U841 1118 aa12.49□□□□□ -0.41
ATM-226ENST00000638443 STK31Q9BXU1 1019 aa12.49□□□□□ -0.41
ATM-226ENST00000638443 PDZRN3Q9UPQ7 1066 aa12.49□□□□□ -0.41
ATM-226ENST00000638443 SPG7Q9UQ90 795 aa12.49□□□□□ -0.41
ATM-226ENST00000638443 PTPRCP08575 1304 aa12.49□□□□□ -0.41
ATM-226ENST00000638443 CCDC30Q5VVM6 783 aa12.49□□□□□ -0.41
ATM-226ENST00000638443 BABAM1Q9NWV8 329 aa12.49□□□□□ -0.41
ATM-226ENST00000638443 BTG4Q9NY30 223 aa12.49□□□□□ -0.41
ATM-226ENST00000638443 PDE4AP27815 886 aa12.48□□□□□ -0.41
ATM-226ENST00000638443 NFATC2IPQ8NCF5 419 aa12.48□□□□□ -0.41
ATM-226ENST00000638443 MEIS3Q99687 375 aa12.48□□□□□ -0.41
ATM-226ENST00000638443 RWDD1Q9H446 243 aaPredicted RBP12.48□□□□□ -0.41
ATM-226ENST00000638443 CHPF2Q9P2E5 772 aa12.48□□□□□ -0.41
ATM-226ENST00000638443 PARP4Q9UKK3 1724 aaKnown RBP12.48□□□□□ -0.41
ATM-226ENST00000638443 FKBP5Q13451 457 aaPredicted RBP12.47□□□□□ -0.41
ATM-226ENST00000638443 INTS3Q68E01 1043 aaKnown RBP12.47□□□□□ -0.41
ATM-226ENST00000638443 SIRT2Q8IXJ6 389 aa12.47□□□□□ -0.41
ATM-226ENST00000638443 IFNL2Q8IZJ0 200 aa12.47□□□□□ -0.41
ATM-226ENST00000638443 PHLPP1O60346 1717 aa12.47□□□□□ -0.41
ATM-226ENST00000638443 SHANK3Q9BYB0 1731 aa12.47□□□□□ -0.41
ATM-226ENST00000638443 EVA1CP58658 441 aa12.47□□□□□ -0.41
ATM-226ENST00000638443 SLC52A2Q9HAB3 445 aa12.47□□□□□ -0.41
ATM-226ENST00000638443 C5P01031 1676 aa12.46□□□□□ -0.41
ATM-226ENST00000638443 APBB1O00213 710 aa12.46□□□□□ -0.41
ATM-226ENST00000638443 HDAC1Q13547 482 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 543 ms