RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 PTPRNQ16849 979 aa3.64□□□□□ -1.83
HMHB1-202ENST00000638299 Q3C1V9 767 aa3.64□□□□□ -1.83
HMHB1-202ENST00000638299 CC2D2BQ6DHV5 1058 aa3.64□□□□□ -1.83
HMHB1-202ENST00000638299 ATCAYQ86WG3 371 aa3.64□□□□□ -1.83
HMHB1-202ENST00000638299 SCG3Q8WXD2 468 aaKnown RBP3.64□□□□□ -1.83
HMHB1-202ENST00000638299 SLC39A7Q92504 469 aa3.64□□□□□ -1.83
HMHB1-202ENST00000638299 FAM129BQ96TA1 746 aa3.64□□□□□ -1.83
HMHB1-202ENST00000638299 PSMD1Q99460 953 aa3.64□□□□□ -1.83
HMHB1-202ENST00000638299 CARD14Q9BXL6 1004 aa3.64□□□□□ -1.83
HMHB1-202ENST00000638299 PRDM16Q9HAZ2 1276 aa3.64□□□□□ -1.83
HMHB1-202ENST00000638299 SRA1Q9HD15 236 aaKnown RBP3.64□□□□□ -1.83
HMHB1-202ENST00000638299 METRNQ9UJH8 293 aa3.64□□□□□ -1.83
HMHB1-202ENST00000638299 GPSM3Q9Y4H4 160 aa3.64□□□□□ -1.83
HMHB1-202ENST00000638299 PNMA6FA0A0J9YX94 578 aa3.63□□□□□ -1.83
HMHB1-202ENST00000638299 ESPNB1AK53 854 aa3.63□□□□□ -1.83
HMHB1-202ENST00000638299 TNFRSF10BO14763 440 aa3.63□□□□□ -1.83
HMHB1-202ENST00000638299 ZBTB39O15060 712 aa3.63□□□□□ -1.83
HMHB1-202ENST00000638299 TPD52L2O43399 206 aaKnown RBP3.63□□□□□ -1.83
HMHB1-202ENST00000638299 ACTN4O43707 911 aaKnown RBP3.63□□□□□ -1.83
HMHB1-202ENST00000638299 STK10O94804 968 aaKnown RBP3.63□□□□□ -1.83
HMHB1-202ENST00000638299 FGRP09769 529 aa3.63□□□□□ -1.83
HMHB1-202ENST00000638299 HDGFP51858 240 aaKnown RBP3.63□□□□□ -1.83
HMHB1-202ENST00000638299 AAMPQ13685 434 aa3.63□□□□□ -1.83
HMHB1-202ENST00000638299 GNL2Q13823 731 aaKnown RBP3.63□□□□□ -1.83
HMHB1-202ENST00000638299 ENOX2Q16206 610 aaKnown RBP3.63□□□□□ -1.83
HMHB1-202ENST00000638299 KMT5BQ4FZB7 885 aa3.63□□□□□ -1.83
HMHB1-202ENST00000638299 POTEHQ6S545 545 aa3.63□□□□□ -1.83
HMHB1-202ENST00000638299 ZBTB33Q86T24 672 aa3.63□□□□□ -1.83
HMHB1-202ENST00000638299 TNS4Q8IZW8 715 aa3.63□□□□□ -1.83
HMHB1-202ENST00000638299 CHMP7Q8WUX9 453 aaPredicted RBP3.63□□□□□ -1.83
HMHB1-202ENST00000638299 UBE2Q2Q8WVN8 375 aa3.63□□□□□ -1.83
HMHB1-202ENST00000638299 COL26A1Q96A83 441 aa3.63□□□□□ -1.83
HMHB1-202ENST00000638299 THAP11Q96EK4 314 aa3.63□□□□□ -1.83
HMHB1-202ENST00000638299 ZNF358Q9NW07 568 aa3.63□□□□□ -1.83
HMHB1-202ENST00000638299 IFT57Q9NWB7 429 aa3.63□□□□□ -1.83
HMHB1-202ENST00000638299 COL4A3BPQ9Y5P4 624 aa3.63□□□□□ -1.83
HMHB1-202ENST00000638299 MAGEB6P1A0A0J9YX57 407 aa3.62□□□□□ -1.83
HMHB1-202ENST00000638299 TMEM229AB2RXF0 380 aa3.62□□□□□ -1.83
HMHB1-202ENST00000638299 PEX14O75381 377 aa3.62□□□□□ -1.83
HMHB1-202ENST00000638299 CCNYL3P0C7X3 344 aa3.62□□□□□ -1.83
HMHB1-202ENST00000638299 IGFBP4P22692 258 aa3.62□□□□□ -1.83
HMHB1-202ENST00000638299 MZF1P28698 734 aaPredicted RBP3.62□□□□□ -1.83
HMHB1-202ENST00000638299 DOK7Q18PE1 504 aa3.62□□□□□ -1.83
HMHB1-202ENST00000638299 TBCELQ5QJ74 424 aa3.62□□□□□ -1.83
HMHB1-202ENST00000638299 PTCRAQ6ISU1 281 aaPredicted RBP3.62□□□□□ -1.83
HMHB1-202ENST00000638299 C16orf46Q6P387 395 aa3.62□□□□□ -1.83
HMHB1-202ENST00000638299 SH3BP5LQ7L8J4 393 aa3.62□□□□□ -1.83
HMHB1-202ENST00000638299 FILIP1Q7Z7B0 1213 aa3.62□□□□□ -1.83
HMHB1-202ENST00000638299 USP48Q86UV5 1035 aa3.62□□□□□ -1.83
HMHB1-202ENST00000638299 RPUSD2Q8IZ73 545 aaKnown RBP3.62□□□□□ -1.83
HMHB1-202ENST00000638299 ZNF654Q8IZM8 581 aa3.62□□□□□ -1.83
HMHB1-202ENST00000638299 NKX2-3Q8TAU0 364 aa3.62□□□□□ -1.83
HMHB1-202ENST00000638299 METTL14Q9HCE5 456 aaKnown RBP3.62□□□□□ -1.83
HMHB1-202ENST00000638299 PRDM9Q9NQV7 894 aa3.62□□□□□ -1.83
HMHB1-202ENST00000638299 EVA1BQ9NVM1 165 aa3.62□□□□□ -1.83
HMHB1-202ENST00000638299 G3BP2Q9UN86 482 aaKnown RBP3.62□□□□□ -1.83
HMHB1-202ENST00000638299 NOP58Q9Y2X3 529 aaKnown RBP3.62□□□□□ -1.83
HMHB1-202ENST00000638299 PCDHB11Q9Y5F2 797 aa3.62□□□□□ -1.83
HMHB1-202ENST00000638299 ATAD2Q6PL18 1390 aa3.62□□□□□ -1.83
HMHB1-202ENST00000638299 A0A1W2PRU2 124 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 PLEKHD1A6NEE1 506 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 M0R2N6 131 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 HAX1O00165 279 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 ZBTB24O43167 697 aaPredicted RBP3.61□□□□□ -1.83
HMHB1-202ENST00000638299 FOXO3O43524 673 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 ATF4P18848 351 aaPredicted RBP3.61□□□□□ -1.83
HMHB1-202ENST00000638299 IBSPP21815 317 aaPredicted RBP3.61□□□□□ -1.83
HMHB1-202ENST00000638299 HSD3B2P26439 372 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 GNA15P30679 374 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 ANAPC15P60006 121 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 IRX6P78412 446 aaPredicted RBP3.61□□□□□ -1.83
HMHB1-202ENST00000638299 ATP2B2Q01814 1243 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 PAK2Q13177 524 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 FAM98CQ17RN3 349 aaKnown RBP3.61□□□□□ -1.83
HMHB1-202ENST00000638299 PLEKHG6Q3KR16 790 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 COX20Q5RI15 118 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 SCUBE3Q8IX30 993 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 EXOC8Q8IYI6 725 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 FAM160A2Q8N612 972 aaPredicted RBP3.61□□□□□ -1.83
HMHB1-202ENST00000638299 STAG1Q8WVM7 1258 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 GPKOWQ92917 476 aaPredicted RBP eCLIP3.61□□□□□ -1.83
HMHB1-202ENST00000638299 DMRTB1Q96MA1 342 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 CITED4Q96RK1 184 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 NUDT12Q9BQG2 462 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMHB1-202ENST00000638299 TSPAN10Q9H1Z9 355 aaPredicted RBP3.61□□□□□ -1.83
HMHB1-202ENST00000638299 KANSL2Q9H9L4 492 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 NEUROD4Q9HD90 331 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 PCDH12Q9NPG4 1184 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 CHPF2Q9P2E5 772 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 GABBR1Q9UBS5 961 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 RABGEF1Q9UJ41 708 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 LRFN2Q9ULH4 789 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 POLIQ9UNA4 740 aa3.61□□□□□ -1.83
HMHB1-202ENST00000638299 PSDA5PKW4 1024 aaPredicted RBP3.6□□□□□ -1.83
HMHB1-202ENST00000638299 K7ELQ4 463 aaPredicted RBP3.6□□□□□ -1.83
HMHB1-202ENST00000638299 OPLAHO14841 1288 aa3.6□□□□□ -1.83
HMHB1-202ENST00000638299 GABBR2O75899 941 aa3.6□□□□□ -1.83
HMHB1-202ENST00000638299 XRCC5P13010 732 aaKnown RBP3.6□□□□□ -1.83
HMHB1-202ENST00000638299 SCTRP47872 440 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms